Top scanpy issues

Figures related to rankings and heatmap could be transposed.

Xparx picture Xparx·6 Nov 2018·9 Comments

Issue with repeated variables in rank_genes_groups_stacked_violin

a-munoz-rojas picture a-munoz-rojas·31 Aug 2018·6 Comments
😄1

Regressing out, potential boundary problem

jayypaul picture jayypaul·8 Aug 2018·9 Comments

cluster average expression

wangjiawen2013 picture wangjiawen2013·22 Jun 2018·9 Comments

regress_out n_jobs question

question
zhangguy picture zhangguy·28 Aug 2020·5 Comments

Understanding normalization and log transformation

bug
chris-rands picture chris-rands·11 Aug 2020·8 Comments

sc.pl.paga_path: TypeError: float() argument must be a string or a number, not 'csr_matrix'

bug
plrlhb12 picture plrlhb12·26 Jun 2020·2 Comments

Legends not accessible via provided axis and misplaced (scatterplot, subplots)

bug plots
picciama picture picciama·30 May 2020·4 Comments

sc.pp.neighbors throws KeyError: diffmap_evals due to obsm concatenation

bug
gokceneraslan picture gokceneraslan·3 Feb 2020·9 Comments

gene find with visualization functions but not with subsetting

bug
shendong124 picture shendong124·16 Jan 2020·2 Comments
 Previous issues
Next issues