Top scanpy issues

Finding a better home for cluster centroids (i.e. 馃毇_tmp_cluster_pos)

enhancement
gokceneraslan picture gokceneraslan路29 Nov 2019路4 Comments

Introduce GLM-PCA to scanpy.external

enhancement
flying-sheep picture flying-sheep路10 Oct 2019路14 Comments
👍2

sc.tl.umap numba error when used with init_pos="paga"

jenzopr picture jenzopr路29 May 2019路17 Comments

Runtime warning by rank_genes_groups

bioguy2018 picture bioguy2018路21 May 2019路22 Comments

ImportError: cannot import name 'IndexMixin'

duplicate
genecell picture genecell路14 May 2019路7 Comments

Type annotation considerations

question
flying-sheep picture flying-sheep路21 Nov 2018路38 Comments

mean expression and percentage

wangjiawen2013 picture wangjiawen2013路30 Oct 2018路5 Comments

Export figures in full vector mode

juugii picture juugii路8 Oct 2018路3 Comments

Interactive scatter plots

enhancement
falexwolf picture falexwolf路3 Sep 2018路4 Comments

normalize_per_cell does not remove zero-expression cells from adata.raw

gokceneraslan picture gokceneraslan路20 Jul 2018路11 Comments
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