Scout: "in COSMIC and in Clinvar" filter in variant list view.

Created on 4 May 2021  路  3Comments  路  Source: Clinical-Genomics/scout

Emma T and us were discussing filtering variants based on if they are present in COSMIC and/or ClinVar. This is to provide an option to look into variants that have hits in ClinVar and COSMIC before doing further investigation.

PS: I don't have Emma's GitHub account and can't tag her here for further input.

Customer Request Cancer Frontend

Most helpful comment

Did they want the variants pre-filtered (with a checkbox that is already checked when you first land on the variants page) or should be the filtering not done automatically (checkbox not checked)?

All 3 comments

@mhkc Do you have this in your Cancer view refactor? I didn't see it there, but I thought to ask you as well.

Did they want the variants pre-filtered (with a checkbox that is already checked when you first land on the variants page) or should be the filtering not done automatically (checkbox not checked)?

Empty checkbox is actually quite good.

Also, What a legend! Thanks for adding this feature so quickly.

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