Scout: Scout IGV bug, "Unparsable bed record: chr14 23299091"

[hassanfa]

I click on case, click on variants then variant, and then click on gene. An IGV error pops up:

I'm not even checking chr14, the gene is in chr13: https://scout.scilifelab.se/cust000/balsamic-validation-gmsmyeloid-tumor-only/3771fe578bf95fce211f6a0635c8e444?cancer=yes

[northwestwitch]

Other genes seem to work fine. It's possibly a bug in igv.js, I'll ask there. Thanks @hassanfa !

[dnil]

There have been a few issues on the IGV repo lately with bed compression and streaming. We could try upgrading to latest?

[northwestwitch]

We're on version 2.7.5 and the newest is 2.8. Yes, let's try to upgrade!

[northwestwitch]

They have fixed now, new igv.js release 2.8.1!