Joss-reviews: [PRE REVIEW]: A Repository to Simulate the Spread of COVID-19 in any Population with a Known Age-Structure, Made in Tübingen.

Created on 27 Oct 2020  ·  17Comments  ·  Source: openjournals/joss-reviews

Submitting author: @vahid-sb (Vahid S. Bokharaie)
Repository: https://github.com/vahid-sb/MiTepid_sim
Version: v0.0.5
Editor: @majensen
Reviewers: @AngryMaciek
Managing EiC: Arfon Smith

:warning: JOSS reduced service mode :warning:

Due to the challenges of the COVID-19 pandemic, JOSS is currently operating in a "reduced service mode". You can read more about what that means in our blog post.

Author instructions

Thanks for submitting your paper to JOSS @vahid-sb. Currently, there isn't an JOSS editor assigned to your paper.

@vahid-sb if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). In addition, this list of people have already agreed to review for JOSS and may be suitable for this submission (please start at the bottom of the list).

Editor instructions

The JOSS submission bot @whedon is here to help you find and assign reviewers and start the main review. To find out what @whedon can do for you type:

@whedon commands
Python TeX pre-review

All 17 comments

Hello human, I'm @whedon, a robot that can help you with some common editorial tasks.

:warning: JOSS reduced service mode :warning:

Due to the challenges of the COVID-19 pandemic, JOSS is currently operating in a "reduced service mode". You can read more about what that means in our blog post.

For a list of things I can do to help you, just type:

@whedon commands

For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

@whedon generate pdf
Software report (experimental):

github.com/AlDanial/cloc v 1.84  T=0.07 s (275.8 files/s, 41828.3 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
Python                          14            364            743           1471
Markdown                         1             21              0             37
reStructuredText                 1             26              5             36
TeX                              1              4              0             22
YAML                             1              0              0              1
-------------------------------------------------------------------------------
SUM:                            18            415            748           1567
-------------------------------------------------------------------------------


Statistical information for the repository '0893a9d0c62b9e199f3b9639' was
gathered on 2020/10/27.
The following historical commit information, by author, was found:

Author                     Commits    Insertions      Deletions    % of changes
Vahid Bokharaie                 13          3712           1134          100.00

Below are the number of rows from each author that have survived and are still
intact in the current revision:

Author                     Rows      Stability          Age       % in comments
Vahid Bokharaie            2578           69.5          0.1                8.26
Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

OK DOIs

- 10.1101/2020.10.16.20213835 is OK
- 10.1101/2020.04.10.20060681 is OK

MISSING DOIs

- None

INVALID DOIs

- None

:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:

@whedon invite @majensen as editor

:wave: @majensen - would you be willing to edit this submission for JOSS?

@majensen has been invited to edit this submission.

@whedon assign me as editor

OK, the editor is @majensen

⚡️ thanks @majensen

@oeco28 - how's it going in the Palouse? Could I interest you in reviewing this software for the Journal of Open Source Software? Please have a look at the review process and let me know in this thread. Or, if you have a colleague you could recommend, that would be wonderful. --@majensen

Dude!!
All good! Staying safe. How are you? Long time no see! Let me see. Do you
mind if I take a look at the review process. when do you need it? I have
three kids under 6 at home and everything takes a bit longer than usual!

big hugs
Omar

On Wed, Nov 4, 2020 at 12:17 PM Mark Jensen notifications@github.com
wrote:

@oeco28
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You are receiving this because you were mentioned.
Reply to this email directly, view it on GitHub
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--
Omar E. Cornejo, PhD
Associate Professor,
School of Biological Sciences
Washington State University
Heald 429. PO Box 644236
Pullman, WA. 99164-4236

@oeco28 - 3 kids ??? You HAVE been busy, my friend! Take your time-

@AngryMaciek -- would you have time and inclination to review this work for JOSS? Please let me know - appreciated!

@majensen : sure, I'd be very glad to experience the process from the other side.
I have just added myself to the reviewers list for JOSS, it's official :)

@whedon assign @AngryMaciek as reviewer

OK, @AngryMaciek is now a reviewer

@oeco28 -- what do you think, do you have time to review?

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