Joss-reviews: [REVIEW]: The Experiment Factory: Reproducible Experiment Containers

[whedon]

Submitting author: @vsoch (Vanessa Sochat)
Repository: https://www.github.com/expfactory/expfactory
Version: v3.0.0
Editor: @leeper
Reviewer: @oesteban
Archive: 10.5281/zenodo.1117203

Status

Status badge code:

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Markdown: [![status](http://joss.theoj.org/papers/91829e3895316bb54bf4a3b5e32cdb71/status.svg)](http://joss.theoj.org/papers/91829e3895316bb54bf4a3b5e32cdb71)

Reviewers and authors:

Please avoid lengthy details of difficulties in the review thread. Instead, please create a new issue in the target repository and link to those issues (especially acceptance-blockers) in the review thread below. (For completists: if the target issue tracker is also on GitHub, linking the review thread in the issue or vice versa will create corresponding breadcrumb trails in the link target.)

Reviewer instructions & questions

@oesteban, please carry out your review in this issue by updating the checklist below. If you cannot edit the checklist please:

1. Make sure you're logged in to your GitHub account
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The reviewer guidelines are available here: https://joss.theoj.org/about#reviewer_guidelines. Any questions/concerns please let @leeper know.

### Conflict of interest

• [x] As the reviewer I confirm that I have read the JOSS conflict of interest policy and that there are no conflicts of interest for me to review this work.

Code of Conduct

• [x] I confirm that I read and will adhere to the JOSS code of conduct.

General checks

• [x] Repository: Is the source code for this software available at the repository url?
• [x] License: Does the repository contain a plain-text LICENSE file with the contents of an OSI approved software license?
• [x] Version: Does the release version given match the GitHub release (v3.0.0)?
• [x] Authorship: Has the submitting author (@vsoch) made major contributions to the software? Does the full list of paper authors seem appropriate and complete?

Functionality

• [x] Installation: Does installation proceed as outlined in the documentation?
• [x] Functionality: Have the functional claims of the software been confirmed?
• [x] Performance: If there are any performance claims of the software, have they been confirmed? (If there are no claims, please check off this item.)

Documentation

• [x] A statement of need: Do the authors clearly state what problems the software is designed to solve and who the target audience is?
• [x] Installation instructions: Is there a clearly-stated list of dependencies? Ideally these should be handled with an automated package management solution.
• [x] Example usage: Do the authors include examples of how to use the software (ideally to solve real-world analysis problems).
• [x] Functionality documentation: Is the core functionality of the software documented to a satisfactory level (e.g., API method documentation)?
• [x] Automated tests: Are there automated tests or manual steps described so that the function of the software can be verified?
• [x] Community guidelines: Are there clear guidelines for third parties wishing to 1) Contribute to the software 2) Report issues or problems with the software 3) Seek support

Software paper

• [x] Authors: Does the paper.md file include a list of authors with their affiliations?
• [x] A statement of need: Do the authors clearly state what problems the software is designed to solve and who the target audience is?
• [x] References: Do all archival references that should have a DOI list one (e.g., papers, datasets, software)?

[whedon]

Hello human, I'm @whedon. I'm here to help you with some common editorial tasks. @oesteban it looks like you're currently assigned as the reviewer for this paper :tada:.

:star: Important :star:

If you haven't already, you should seriously consider unsubscribing from GitHub notifications for this (https://github.com/openjournals/joss-reviews) repository. As a reviewer, you're probably currently watching this repository which means for GitHub's default behaviour you will receive notifications (emails) for all reviews 😿

To fix this do the following two things:

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For a list of things I can do to help you, just type:

@whedon commands

[whedon]

Attempting PDF compilation. Reticulating splines etc...

[whedon]

https://github.com/openjournals/joss-papers/blob/joss.00521/joss.00521/10.21105.joss.00521.pdf

[leeper]

@whedon set 10.5281/zenodo.1117203 as archive

[whedon]

OK. 10.5281/zenodo.1117203 is the archive.

[leeper]

@oesteban Can you confirm that you are happy with the package in its current form?

[oesteban]

Yes, I do.

On Feb 4, 2018 08:35, "Thomas J. Leeper" [e-mail] wrote:

@oesteban https://github.com/oesteban Can you confirm that you are
happy with the package in its current form?

—
You are receiving this because you were mentioned.
Reply to this email directly, view it on GitHub
https://github.com/openjournals/joss-reviews/issues/521#issuecomment-362920258,
or mute the thread
https://github.com/notifications/unsubscribe-auth/AAkhxqvnBbxdY-EVzVMJbs7KwZlBjhxLks5tRdxAgaJpZM4RLSRN
.

[leeper]

Thank you, @oesteban!

[leeper]

@arfon This one's over to you.

[arfon]

@oesteban - many thanks for your review here and to @leeper for editing this submission ✨

@vsoch - your paper is now accepted into JOSS and your DOI is https://doi.org/10.21105/joss.00521 ⚡️ 🚀 💥

[whedon]

:tada::tada::tada: Congratulations on your paper acceptance! :tada::tada::tada:

If you would like to include a link to your paper from your README use the following code snippet:

[![DOI](http://joss.theoj.org/papers/10.21105/joss.00521/status.svg)](https://doi.org/10.21105/joss.00521)

This is how it will look in your documentation:

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[vsoch]

:avocado: :avocado: :avocado: woohooo!! thanks @whedon @oesteban @arfon and @leeper ! :avocado: :avocado: :avocado: