Xarray: Import error when calling open_rasterio
Problem Description
When using xarray.open_rasterio for loading the Bedmap2 dataset from geoTIFF files we are getting an ImportError after xarray tries to import gdal_version from rasterio._base.
The error is raised after uploading rasterio to 1.0.25. When using rasterio 1.0.24, the problem does not exist.
This error was caught by @ChetGoerzen and originally reported on https://github.com/fatiando/rockhound/issues/53.
import xarray as xr
xr.open_rasterio("bedmap2_bed.tif")
```python-traceback
Traceback (most recent call last):
File "
File "/home/santi/.miniconda3/envs/rockhound/lib/python3.7/site-packages/xarray/backends/rasterio_.py", line 214, in open_rasterio
import rasterio
File "/home/santi/.miniconda3/envs/rockhound/lib/python3.7/site-packages/rasterio/__init__.py", line 22, in
from rasterio._base import gdal_version
ImportError: libtiledb.so.1.6.0: cannot open shared object file: No such file or directory
#### Expected Output
```python-traceback
<xarray.DataArray (band: 1, y: 6667, x: 6667)>
[44448889 values with dtype=int16]
Coordinates:
* band (band) int64 1
* y (y) float64 3.333e+06 3.332e+06 3.331e+06 ... -3.332e+06 -3.333e+06
* x (x) float64 -3.333e+06 -3.332e+06 ... 3.332e+06 3.333e+06
Attributes:
transform: (1000.0, 0.0, -3333500.0, 0.0, -1000.0, 3333500.0)
crs: +init=epsg:3031
res: (1000.0, 1000.0)
is_tiled: 1
nodatavals: (32767.0,)
scales: (1.0,)
offsets: (0.0,)
Output of xr.show_versions()
INSTALLED VERSIONS
------------------
commit: None
python: 3.7.3 | packaged by conda-forge | (default, Jul 1 2019, 21:52:21)
[GCC 7.3.0]
python-bits: 64
OS: Linux
OS-release: 4.19.66-1-MANJARO
machine: x86_64
processor:
byteorder: little
LC_ALL: None
LANG: es_AR.utf8
LOCALE: es_AR.UTF-8
libhdf5: None
libnetcdf: None
xarray: 0.12.3
pandas: 0.25.0
numpy: 1.17.0
scipy: 1.3.1
netCDF4: None
pydap: None
h5netcdf: None
h5py: None
Nio: None
zarr: None
cftime: None
nc_time_axis: None
PseudoNetCDF: None
rasterio: None
cfgrib: None
iris: None
bottleneck: None
dask: 2.3.0
distributed: 2.3.0
matplotlib: 3.1.1
cartopy: 0.17.0
seaborn: None
numbagg: None
setuptools: 41.0.1
pip: 19.2.2
conda: None
pytest: 5.1.0
IPython: None
sphinx: 1.8.5
Output of conda list
# packages in environment at /home/santi/.miniconda3/envs/rockhound:
#
# Name Version Build Channel
_libgcc_mutex 0.1 main
affine 2.2.2 py_0 conda-forge
alabaster 0.7.12 py_0 conda-forge
appdirs 1.4.3 py_1 conda-forge
asn1crypto 0.24.0 py37_1003 conda-forge
astroid 2.2.5 py37_0 conda-forge
atomicwrites 1.3.0 py_0 conda-forge
attrs 19.1.0 py_0 conda-forge
babel 2.7.0 py_0 conda-forge
black 19.3b0 py_0 conda-forge
bokeh 1.3.4 py37_0 conda-forge
boost-cpp 1.70.0 h8e57a91_2 conda-forge
bzip2 1.0.8 h516909a_0 conda-forge
ca-certificates 2019.6.16 hecc5488_0 conda-forge
cairo 1.16.0 hfb77d84_1002 conda-forge
cartopy 0.17.0 py37he1be148_1005 conda-forge
certifi 2019.6.16 py37_1 conda-forge
cffi 1.12.3 py37h8022711_0 conda-forge
cfitsio 3.470 hb60a0a2_2 conda-forge
chardet 3.0.4 py37_1003 conda-forge
click 7.0 py_0 conda-forge
click-plugins 1.1.1 py_0 conda-forge
cligj 0.5.0 py_0 conda-forge
cloudpickle 1.2.1 py_0 conda-forge
cmocean 2.0 py_1 conda-forge
colorspacious 1.1.2 pyh24bf2e0_0 conda-forge
coverage 4.5.4 py37h516909a_0 conda-forge
cryptography 2.7 py37h72c5cf5_0 conda-forge
curl 7.65.3 hf8cf82a_0 conda-forge
cycler 0.10.0 py_1 conda-forge
cytoolz 0.10.0 py37h516909a_0 conda-forge
dask 2.3.0 py_0 conda-forge
dask-core 2.3.0 py_0 conda-forge
dbus 1.13.6 he372182_0 conda-forge
distributed 2.3.0 py_0 conda-forge
docutils 0.15.2 py37_0 conda-forge
entrypoints 0.3 py37_1000 conda-forge
expat 2.2.5 he1b5a44_1003 conda-forge
flake8 3.7.8 py37_1 conda-forge
fontconfig 2.13.1 h86ecdb6_1001 conda-forge
freetype 2.10.0 he983fc9_1 conda-forge
freexl 1.0.5 h14c3975_1002 conda-forge
fsspec 0.4.1 py_0 conda-forge
geos 3.7.2 he1b5a44_1 conda-forge
geotiff 1.5.1 h560c3f3_2 conda-forge
gettext 0.19.8.1 hc5be6a0_1002 conda-forge
giflib 5.1.7 h516909a_1 conda-forge
glib 2.58.3 h6f030ca_1002 conda-forge
gst-plugins-base 1.14.5 h0935bb2_0 conda-forge
gstreamer 1.14.5 h36ae1b5_0 conda-forge
hdf4 4.2.13 h9a582f1_1002 conda-forge
hdf5 1.10.5 nompi_h3c11f04_1100 conda-forge
heapdict 1.0.0 py37_1000 conda-forge
icu 64.2 he1b5a44_0 conda-forge
idna 2.8 py37_1000 conda-forge
imagesize 1.1.0 py_0 conda-forge
importlib_metadata 0.18 py37_0 conda-forge
isort 4.3.21 py37_0 conda-forge
jinja2 2.10.1 py_0 conda-forge
jpeg 9c h14c3975_1001 conda-forge
json-c 0.13.1 h14c3975_1001 conda-forge
kealib 1.4.10 h58c409b_1005 conda-forge
kiwisolver 1.1.0 py37hc9558a2_0 conda-forge
krb5 1.16.3 h05b26f9_1001 conda-forge
lazy-object-proxy 1.4.1 py37h516909a_0 conda-forge
libblas 3.8.0 12_openblas conda-forge
libcblas 3.8.0 12_openblas conda-forge
libcurl 7.65.3 hda55be3_0 conda-forge
libdap4 3.20.2 hd48c02d_1000 conda-forge
libedit 3.1.20170329 hf8c457e_1001 conda-forge
libffi 3.2.1 he1b5a44_1006 conda-forge
libgcc-ng 9.1.0 hdf63c60_0
libgdal 3.0.1 hbef8c27_6 conda-forge
libgfortran-ng 7.3.0 hdf63c60_0
libiconv 1.15 h516909a_1005 conda-forge
libkml 1.3.0 h4fcabce_1010 conda-forge
liblapack 3.8.0 12_openblas conda-forge
libnetcdf 4.6.2 h056eaf5_1002 conda-forge
libopenblas 0.3.7 h6e990d7_1 conda-forge
libpng 1.6.37 hed695b0_0 conda-forge
libpq 11.5 hd9ab2ff_0 conda-forge
libspatialite 4.3.0a he1bb1e1_1029 conda-forge
libssh2 1.8.2 h22169c7_2 conda-forge
libstdcxx-ng 9.1.0 hdf63c60_0
libtiff 4.0.10 h57b8799_1003 conda-forge
libuuid 2.32.1 h14c3975_1000 conda-forge
libxcb 1.13 h14c3975_1002 conda-forge
libxml2 2.9.9 hee79883_2 conda-forge
locket 0.2.0 py_2 conda-forge
lz4-c 1.8.3 he1b5a44_1001 conda-forge
markupsafe 1.1.1 py37h14c3975_0 conda-forge
matplotlib 3.1.1 py37_1 conda-forge
matplotlib-base 3.1.1 py37he7580a8_1 conda-forge
mccabe 0.6.1 py_1 conda-forge
more-itertools 7.2.0 py_0 conda-forge
msgpack-python 0.6.1 py37h6bb024c_0 conda-forge
ncurses 6.1 hf484d3e_1002 conda-forge
numpy 1.17.0 py37h95a1406_0 conda-forge
numpydoc 0.9.1 py_0 conda-forge
olefile 0.46 py_0 conda-forge
openjpeg 2.3.1 h58a6597_0 conda-forge
openssl 1.1.1c h516909a_0 conda-forge
owslib 0.18.0 py_0 conda-forge
packaging 19.0 py_0 conda-forge
pandas 0.25.0 py37hb3f55d8_0 conda-forge
partd 1.0.0 py_0 conda-forge
pcre 8.41 hf484d3e_1003 conda-forge
pillow 6.1.0 py37h6b7be26_1 conda-forge
pip 19.2.2 py37_0 conda-forge
pixman 0.38.0 h516909a_1003 conda-forge
pluggy 0.12.0 py_0 conda-forge
pooch 0.5.2 py37_0 conda-forge
poppler 0.67.0 ha967d66_7 conda-forge
poppler-data 0.4.9 1 conda-forge
postgresql 11.5 hc63931a_0 conda-forge
proj4 6.1.0 he751ad9_2 conda-forge
psutil 5.6.3 py37h516909a_0 conda-forge
pthread-stubs 0.4 h14c3975_1001 conda-forge
py 1.8.0 py_0 conda-forge
pycodestyle 2.5.0 py_0 conda-forge
pycparser 2.19 py37_1 conda-forge
pyepsg 0.4.0 py_0 conda-forge
pyflakes 2.1.1 py_0 conda-forge
pygments 2.4.2 py_0 conda-forge
pykdtree 1.3.1 py37h3010b51_1002 conda-forge
pylint 2.3.1 py37_0 conda-forge
pyopenssl 19.0.0 py37_0 conda-forge
pyparsing 2.4.2 py_0 conda-forge
pyproj 2.2.1 py37hc44880f_0 conda-forge
pyqt 5.9.2 py37hcca6a23_2 conda-forge
pyshp 2.1.0 py_0 conda-forge
pysocks 1.7.0 py37_0 conda-forge
pytest 5.1.0 py37_0 conda-forge
pytest-cov 2.7.1 py_0 conda-forge
python 3.7.3 h33d41f4_1 conda-forge
python-dateutil 2.8.0 py_0 conda-forge
pytz 2019.2 py_0 conda-forge
pyyaml 5.1.2 py37h516909a_0 conda-forge
qt 5.9.7 h0c104cb_3 conda-forge
rasterio 1.0.25 py37h900e953_2 conda-forge
readline 8.0 hf8c457e_0 conda-forge
requests 2.22.0 py37_1 conda-forge
rockhound 0.1.0+5.g39043fa dev_0 <develop>
scipy 1.3.1 py37h921218d_2 conda-forge
setuptools 41.0.1 py37_0 conda-forge
shapely 1.6.4 py37hec07ddf_1006 conda-forge
sip 4.19.8 py37hf484d3e_1000 conda-forge
six 1.12.0 py37_1000 conda-forge
snowballstemmer 1.9.0 py_0 conda-forge
snuggs 1.4.6 py_0 conda-forge
sortedcontainers 2.1.0 py_0 conda-forge
sphinx 1.8.5 py37_0 conda-forge
sphinx-gallery 0.4.0 py37_0 conda-forge
sphinx_rtd_theme 0.4.3 py_0 conda-forge
sphinxcontrib-websupport 1.1.2 py_0 conda-forge
sqlite 3.29.0 hcee41ef_0 conda-forge
tbb 2018.0.5 h2d50403_0 conda-forge
tblib 1.4.0 py_0 conda-forge
tiledb 1.6.2 h69c774e_0 conda-forge
tk 8.6.9 hed695b0_1002 conda-forge
toml 0.10.0 py_0 conda-forge
toolz 0.10.0 py_0 conda-forge
tornado 6.0.3 py37h516909a_0 conda-forge
tzcode 2019a h516909a_1002 conda-forge
urllib3 1.25.3 py37_0 conda-forge
viscm 0.7 pyh24bf2e0_0 conda-forge
wcwidth 0.1.7 py_1 conda-forge
wheel 0.33.4 py37_0 conda-forge
wrapt 1.11.2 py37h516909a_0 conda-forge
xarray 0.12.3 py_0 conda-forge
xerces-c 3.2.2 h8412b87_1004 conda-forge
xorg-kbproto 1.0.7 h14c3975_1002 conda-forge
xorg-libice 1.0.10 h516909a_0 conda-forge
xorg-libsm 1.2.3 h84519dc_1000 conda-forge
xorg-libx11 1.6.8 h516909a_0 conda-forge
xorg-libxau 1.0.9 h14c3975_0 conda-forge
xorg-libxdmcp 1.1.3 h516909a_0 conda-forge
xorg-libxext 1.3.4 h516909a_0 conda-forge
xorg-libxrender 0.9.10 h516909a_1002 conda-forge
xorg-renderproto 0.11.1 h14c3975_1002 conda-forge
xorg-xextproto 7.3.0 h14c3975_1002 conda-forge
xorg-xproto 7.0.31 h14c3975_1007 conda-forge
xz 5.2.4 h14c3975_1001 conda-forge
yaml 0.1.7 h14c3975_1001 conda-forge
zict 1.0.0 py_0 conda-forge
zipp 0.5.2 py_0 conda-forge
zlib 1.2.11 h516909a_1005 conda-forge
zstd 1.4.0 h3b9ef0a_0 conda-forge
santisoler
All 2 comments
from rasterio._base import gdal_version is coming from inside rasterio/__init__.py, so it looks like you have broken rasterio install in general. Does import rasterio work for you, outside of xarray?
shoyer
on 19 Aug 2019
👍1
Hi @shoyer! Thanks for your quick response. You're right, I get the same error when trying to import rasterio.
I removed the rasterio installed by conda and reinstalled it with pip. Now I can import rasterio without any problem. Moreover, xr.show_versions() flags it as installed. So I think there's a problem with the rasterio conda package.
Thanks again for the response, if you don't think this issue is related to xarray, feel free to close it.
Output of xarray.show_versions()
INSTALLED VERSIONS
------------------
commit: None
python: 3.7.3 | packaged by conda-forge | (default, Jul 1 2019, 21:52:21)
[GCC 7.3.0]
python-bits: 64
OS: Linux
OS-release: 4.19.66-1-MANJARO
machine: x86_64
processor:
byteorder: little
LC_ALL: None
LANG: es_AR.utf8
LOCALE: es_AR.UTF-8
libhdf5: None
libnetcdf: None
xarray: 0.12.3
pandas: 0.25.0
numpy: 1.17.0
scipy: 1.3.1
netCDF4: None
pydap: None
h5netcdf: None
h5py: None
Nio: None
zarr: None
cftime: None
nc_time_axis: None
PseudoNetCDF: None
rasterio: installed
cfgrib: None
iris: None
bottleneck: None
dask: 2.3.0
distributed: 2.3.0
matplotlib: 3.1.1
cartopy: 0.17.0
seaborn: None
numbagg: None
setuptools: 41.0.1
pip: 19.2.2
conda: None
pytest: 5.1.0
IPython: None
sphinx: 1.8.5
Output of conda list
# packages in environment at /home/santi/.miniconda3/envs/rockhound:
#
# Name Version Build Channel
_libgcc_mutex 0.1 main
affine 2.2.2 py_0 conda-forge
alabaster 0.7.12 py_0 conda-forge
appdirs 1.4.3 py_1 conda-forge
asn1crypto 0.24.0 py37_1003 conda-forge
astroid 2.2.5 py37_0 conda-forge
atomicwrites 1.3.0 py_0 conda-forge
attrs 19.1.0 py_0 conda-forge
babel 2.7.0 py_0 conda-forge
black 19.3b0 py_0 conda-forge
bokeh 1.3.4 py37_0 conda-forge
boost-cpp 1.70.0 h8e57a91_2 conda-forge
bzip2 1.0.8 h516909a_0 conda-forge
ca-certificates 2019.6.16 hecc5488_0 conda-forge
cairo 1.16.0 hfb77d84_1002 conda-forge
cartopy 0.17.0 py37he1be148_1005 conda-forge
certifi 2019.6.16 py37_1 conda-forge
cffi 1.12.3 py37h8022711_0 conda-forge
cfitsio 3.470 hb60a0a2_2 conda-forge
chardet 3.0.4 py37_1003 conda-forge
click 7.0 py_0 conda-forge
click-plugins 1.1.1 py_0 conda-forge
cligj 0.5.0 py_0 conda-forge
cloudpickle 1.2.1 py_0 conda-forge
cmocean 2.0 py_1 conda-forge
colorspacious 1.1.2 pyh24bf2e0_0 conda-forge
coverage 4.5.4 py37h516909a_0 conda-forge
cryptography 2.7 py37h72c5cf5_0 conda-forge
curl 7.65.3 hf8cf82a_0 conda-forge
cycler 0.10.0 py_1 conda-forge
cytoolz 0.10.0 py37h516909a_0 conda-forge
dask 2.3.0 py_0 conda-forge
dask-core 2.3.0 py_0 conda-forge
dbus 1.13.6 he372182_0 conda-forge
distributed 2.3.0 py_0 conda-forge
docutils 0.15.2 py37_0 conda-forge
entrypoints 0.3 py37_1000 conda-forge
expat 2.2.5 he1b5a44_1003 conda-forge
flake8 3.7.8 py37_1 conda-forge
fontconfig 2.13.1 h86ecdb6_1001 conda-forge
freetype 2.10.0 he983fc9_1 conda-forge
freexl 1.0.5 h14c3975_1002 conda-forge
fsspec 0.4.1 py_0 conda-forge
geos 3.7.2 he1b5a44_1 conda-forge
geotiff 1.5.1 h560c3f3_2 conda-forge
gettext 0.19.8.1 hc5be6a0_1002 conda-forge
giflib 5.1.7 h516909a_1 conda-forge
glib 2.58.3 h6f030ca_1002 conda-forge
gst-plugins-base 1.14.5 h0935bb2_0 conda-forge
gstreamer 1.14.5 h36ae1b5_0 conda-forge
hdf4 4.2.13 h9a582f1_1002 conda-forge
hdf5 1.10.5 nompi_h3c11f04_1102 conda-forge
heapdict 1.0.0 py37_1000 conda-forge
icu 64.2 he1b5a44_0 conda-forge
idna 2.8 py37_1000 conda-forge
imagesize 1.1.0 py_0 conda-forge
importlib_metadata 0.18 py37_0 conda-forge
isort 4.3.21 py37_0 conda-forge
jinja2 2.10.1 py_0 conda-forge
jpeg 9c h14c3975_1001 conda-forge
json-c 0.13.1 h14c3975_1001 conda-forge
kealib 1.4.10 h58c409b_1005 conda-forge
kiwisolver 1.1.0 py37hc9558a2_0 conda-forge
krb5 1.16.3 h05b26f9_1001 conda-forge
lazy-object-proxy 1.4.1 py37h516909a_0 conda-forge
libblas 3.8.0 12_openblas conda-forge
libcblas 3.8.0 12_openblas conda-forge
libcurl 7.65.3 hda55be3_0 conda-forge
libdap4 3.20.2 hd48c02d_1000 conda-forge
libedit 3.1.20170329 hf8c457e_1001 conda-forge
libffi 3.2.1 he1b5a44_1006 conda-forge
libgcc-ng 9.1.0 hdf63c60_0
libgdal 3.0.1 hbef8c27_6 conda-forge
libgfortran-ng 7.3.0 hdf63c60_0
libiconv 1.15 h516909a_1005 conda-forge
libkml 1.3.0 h4fcabce_1010 conda-forge
liblapack 3.8.0 12_openblas conda-forge
libnetcdf 4.6.2 h056eaf5_1002 conda-forge
libopenblas 0.3.7 h6e990d7_1 conda-forge
libpng 1.6.37 hed695b0_0 conda-forge
libpq 11.5 hd9ab2ff_1 conda-forge
libspatialite 4.3.0a he1bb1e1_1029 conda-forge
libssh2 1.8.2 h22169c7_2 conda-forge
libstdcxx-ng 9.1.0 hdf63c60_0
libtiff 4.0.10 h57b8799_1003 conda-forge
libuuid 2.32.1 h14c3975_1000 conda-forge
libxcb 1.13 h14c3975_1002 conda-forge
libxml2 2.9.9 hee79883_2 conda-forge
locket 0.2.0 py_2 conda-forge
lz4-c 1.8.3 he1b5a44_1001 conda-forge
markupsafe 1.1.1 py37h14c3975_0 conda-forge
matplotlib 3.1.1 py37_1 conda-forge
matplotlib-base 3.1.1 py37he7580a8_1 conda-forge
mccabe 0.6.1 py_1 conda-forge
more-itertools 7.2.0 py_0 conda-forge
msgpack-python 0.6.1 py37h6bb024c_0 conda-forge
ncurses 6.1 hf484d3e_1002 conda-forge
numpy 1.17.0 py37h95a1406_0 conda-forge
numpydoc 0.9.1 py_0 conda-forge
olefile 0.46 py_0 conda-forge
openjpeg 2.3.1 h58a6597_0 conda-forge
openssl 1.1.1c h516909a_0 conda-forge
owslib 0.18.0 py_0 conda-forge
packaging 19.0 py_0 conda-forge
pandas 0.25.0 py37hb3f55d8_0 conda-forge
partd 1.0.0 py_0 conda-forge
pcre 8.41 hf484d3e_1003 conda-forge
pillow 6.1.0 py37h6b7be26_1 conda-forge
pip 19.2.2 py37_0 conda-forge
pixman 0.38.0 h516909a_1003 conda-forge
pluggy 0.12.0 py_0 conda-forge
pooch 0.5.2 py37_0 conda-forge
poppler 0.67.0 ha967d66_7 conda-forge
poppler-data 0.4.9 1 conda-forge
postgresql 11.5 hc63931a_1 conda-forge
proj4 6.1.0 he751ad9_2 conda-forge
psutil 5.6.3 py37h516909a_0 conda-forge
pthread-stubs 0.4 h14c3975_1001 conda-forge
py 1.8.0 py_0 conda-forge
pycodestyle 2.5.0 py_0 conda-forge
pycparser 2.19 py37_1 conda-forge
pyepsg 0.4.0 py_0 conda-forge
pyflakes 2.1.1 py_0 conda-forge
pygments 2.4.2 py_0 conda-forge
pykdtree 1.3.1 py37h3010b51_1002 conda-forge
pylint 2.3.1 py37_0 conda-forge
pyopenssl 19.0.0 py37_0 conda-forge
pyparsing 2.4.2 py_0 conda-forge
pyproj 2.2.1 py37hc44880f_0 conda-forge
pyqt 5.9.2 py37hcca6a23_2 conda-forge
pyshp 2.1.0 py_0 conda-forge
pysocks 1.7.0 py37_0 conda-forge
pytest 5.1.0 py37_0 conda-forge
pytest-cov 2.7.1 py_0 conda-forge
python 3.7.3 h33d41f4_1 conda-forge
python-dateutil 2.8.0 py_0 conda-forge
pytz 2019.2 py_0 conda-forge
pyyaml 5.1.2 py37h516909a_0 conda-forge
qt 5.9.7 h0c104cb_3 conda-forge
rasterio 1.0.25 pypi_0 pypi
readline 8.0 hf8c457e_0 conda-forge
requests 2.22.0 py37_1 conda-forge
rockhound 0.1.0+5.g39043fa dev_0 <develop>
scipy 1.3.1 py37h921218d_2 conda-forge
setuptools 41.0.1 py37_0 conda-forge
shapely 1.6.4 py37hec07ddf_1006 conda-forge
sip 4.19.8 py37hf484d3e_1000 conda-forge
six 1.12.0 py37_1000 conda-forge
snowballstemmer 1.9.0 py_0 conda-forge
snuggs 1.4.6 py_0 conda-forge
sortedcontainers 2.1.0 py_0 conda-forge
sphinx 1.8.5 py37_0 conda-forge
sphinx-gallery 0.4.0 py37_0 conda-forge
sphinx_rtd_theme 0.4.3 py_0 conda-forge
sphinxcontrib-websupport 1.1.2 py_0 conda-forge
sqlite 3.29.0 hcee41ef_0 conda-forge
tbb 2018.0.5 h2d50403_0 conda-forge
tblib 1.4.0 py_0 conda-forge
tiledb 1.6.2 h69c774e_1 conda-forge
tk 8.6.9 hed695b0_1002 conda-forge
toml 0.10.0 py_0 conda-forge
toolz 0.10.0 py_0 conda-forge
tornado 6.0.3 py37h516909a_0 conda-forge
tzcode 2019a h516909a_1002 conda-forge
urllib3 1.25.3 py37_0 conda-forge
viscm 0.7 pyh24bf2e0_0 conda-forge
wcwidth 0.1.7 py_1 conda-forge
wheel 0.33.6 py37_0 conda-forge
wrapt 1.11.2 py37h516909a_0 conda-forge
xarray 0.12.3 py_0 conda-forge
xerces-c 3.2.2 h8412b87_1004 conda-forge
xorg-kbproto 1.0.7 h14c3975_1002 conda-forge
xorg-libice 1.0.10 h516909a_0 conda-forge
xorg-libsm 1.2.3 h84519dc_1000 conda-forge
xorg-libx11 1.6.8 h516909a_0 conda-forge
xorg-libxau 1.0.9 h14c3975_0 conda-forge
xorg-libxdmcp 1.1.3 h516909a_0 conda-forge
xorg-libxext 1.3.4 h516909a_0 conda-forge
xorg-libxrender 0.9.10 h516909a_1002 conda-forge
xorg-renderproto 0.11.1 h14c3975_1002 conda-forge
xorg-xextproto 7.3.0 h14c3975_1002 conda-forge
xorg-xproto 7.0.31 h14c3975_1007 conda-forge
xz 5.2.4 h14c3975_1001 conda-forge
yaml 0.1.7 h14c3975_1001 conda-forge
zict 1.0.0 py_0 conda-forge
zipp 0.5.2 py_0 conda-forge
zlib 1.2.11 h516909a_1005 conda-forge
zstd 1.4.0 h3b9ef0a_0 conda-forge
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Most helpful comment
Hi @shoyer! Thanks for your quick response. You're right, I get the same error when trying to import
rasterio.I removed the
rasterioinstalled bycondaand reinstalled it withpip. Now I can importrasteriowithout any problem. Moreover,xr.show_versions()flags it as installed. So I think there's a problem with therasterioconda package.Thanks again for the response, if you don't think this issue is related to
xarray, feel free to close it.Output of xarray.show_versions()
Output of conda list