Top tskit issues

Ways to visualize diploid tree sequences that aren't sequences of trees

Python API Visualisation enhancement
petrelharp picture petrelharp·19 Feb 2020·24 Comments

Support for reference sequences

enhancement
jeromekelleher picture jeromekelleher·13 Mar 2019·18 Comments
👍2

Mutation time - backwards compatibility

benjeffery picture benjeffery·29 Jun 2020·16 Comments

Add pedigree data to individual table.

C API Python API enhancement
jeromekelleher picture jeromekelleher·15 Sep 2020·29 Comments

Node out of bounds when trying to simplify large tree sequence

C API
bhaller picture bhaller·10 Nov 2019·19 Comments

Schedule for dropping Python 2.7 support

jeromekelleher picture jeromekelleher·27 Feb 2019·2 Comments
👍5 🎉1

draw_svg(): converting svg to pdf loses text positioning and node circle size

bug
grahamgower picture grahamgower·11 Aug 2020·45 Comments

Valid TS should not allow nodes from multiple populations within the same individual

hyanwong picture hyanwong·6 Aug 2020·20 Comments

simplify removes an ancestor of a sample (!?!?)

petrelharp picture petrelharp·9 Jul 2020·11 Comments

RTD build failing

jeromekelleher picture jeromekelleher·7 Apr 2020·9 Comments
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