Seurat: Error loading H5AD file from ScanPy (different issue from below)

[RoganGrant]

I am attempting to load .h5ad files generated in Scanpy from the following figshare directory: https://figshare.com/articles/Processed_files_to_use_with_scanpy_/8273102 . When I load any of the "droplet" files with ReadH5AD(), I get the following output. Is this potentially an issue with the Scanpy metadata? I don't see a clear reason in the source code why this would occur. Thanks!

Pulling expression matrices and metadata
Data is unscaled
Merging feature-level metadata dataframes
Creating assay object
Storing X as data and raw as counts
Setting highly variable features
Error in tolower(x = selection.method) :
argument "selection.method" is missing, with no default

[MediciPrime]

Glad its not just me, I am having the same problem!! I was able to use this function in the past when Seurat v3 wasn't officially out but some type of recent change has resulted in this error.

Please help!

[lijxug]

Same issue here

[zzwch]

Is there any way bypass this error?

[satijalab]

Apologies for the delay, we are looking into this now

[mojaveazure]

This should be fixed in the development version of Seurat. To install the development version of Seurat, please see the instructions here.

[sergiopolid]

Hello, I'm still having this issue, have this been fixed? I have the development version and is not working neither.

[arutik]

Hello,

Seems like it's not fixed, I'm having the same issue after installing the development version.