Rnaseq: biocontainers_v1.2.0_cv1.img => DOWN ?

Created on 11 Jan 2021 · 5Comments · Source: nf-core/rnaseq

Hi all,

when I try to launch the 3.0 version of the nf-core/rnaseq pipeline with the -profile test,singularity I obtain the following error :

Error executing process > 'RNASEQ:PREPARE_GENOME:GUNZIP_ADDITIONAL_FASTA (gfp.fa.gz)'

Caused by:
  Failed to pull singularity image
  command: singularity pull  --name containers.biocontainers.pro-s3-SingImgsRepo-biocontainers-v1.2.0_cv1-biocontainers_v1.2.0_cv1.img.img.pulling.1610366333659 https://containers.biocontainers.pro/s3/SingImgsRepo/biocontainers/v1.2.0_cv1/biocontainers_v1.2.0_cv1.img > /dev/null
  status : 255
  message:
    INFO:    Downloading network image
    FATAL:   Download did not succeed: 503 <!DOCTYPE HTML PUBLIC "-//IETF//DTD HTML 2.0//EN">
    <html><head>
    <title>503 Service Unavailable</title>
    </head><body>
    <h1>Service Unavailable</h1>
    <p>The server is temporarily unable to service your
    request due to maintenance downtime or capacity
    problems. Please try again later.</p>
    <hr>
    <address>Apache/2.4.18 (Ubuntu) Server at containers.biocontainers.pro Port 80</address>
    </body></html>

Is it something that one of you can reproduce or is it a restriction on my Institute ?

Thank you very much for your help

Best

bug

Source

mdeloger

All 5 comments

I can reproduce this, also simply following the URL gives a 503:

The server is temporarily unable to service your request due to maintenance downtime or capacity problems. Please try again later.

apeltzer on 11 Jan 2021

👍1

Thank you, it seems so that it is down since several days as I tested on Saturday, Sunday and today

mdeloger on 11 Jan 2021

Hi @mdeloger ! Happy new year! The repo may need a bump again. I have reported it https://github.com/BioContainers/containers/issues/391. Hopefully, should be fixed soon.

You should also be able to download all of the containers required for the pipeline via the method I have outlined in https://github.com/nf-core/tools/issues/818#issuecomment-748046559