Nokogiri: ld: symbol(s) not found for architecture i386

[virvit]

Hi.

Having the same issues with installing nokogiri 1.6.7. Have tried everything being told in other issues. Mac Os the latest. Have tried --with-system-libraries with or without paths - nothing worked.

My situation is:

sudo gem install nokogiri -- --with-xml2-include=/opt/local/include/libxml2 --with-xml2-lib=/opt/local/lib
Building native extensions with: '--with-xml2-include=/opt/local/include/libxml2 --with-xml2-lib=/opt/local/lib'
This could take a while...
ERROR:  Error installing nokogiri:
    ERROR: Failed to build gem native extension.

    current directory: /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7/ext/nokogiri
/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/bin/ruby -r ./siteconf20151207-73986-1lla6k5.rb extconf.rb --with-xml2-include=/opt/local/include/libxml2 --with-xml2-lib=/opt/local/lib
checking if the C compiler accepts ... yes
checking if the C compiler accepts -Wno-error=unused-command-line-argument-hard-error-in-future... no
Building nokogiri using packaged libraries.
Using mini_portile version 2.0.0
checking for iconv.h... yes
checking for gzdopen() in -lz... yes
checking for iconv... yes
************************************************************************
IMPORTANT NOTICE:

Building Nokogiri with a packaged version of libxml2-2.9.2
with the following patches applied:
    - 0001-Revert-Missing-initialization-for-the-catalog-module.patch
    - 0002-Fix-missing-entities-after-CVE-2014-3660-fix.patch
    - 0003-Stop-parsing-on-entities-boundaries-errors.patch
    - 0004-Cleanup-conditional-section-error-handling.patch
    - 0005-CVE-2015-1819-Enforce-the-reader-to-run-in-constant-.patch
    - 0006-Another-variation-of-overflow-in-Conditional-section.patch
    - 0007-Fix-an-error-in-previous-Conditional-section-patch.patch
    - 0008-CVE-2015-8035-Fix-XZ-compression-support-loop.patch
    - 0009-Updated-config.guess.patch
    - 0010-Fix-parsering-short-unclosed-comment-uninitialized-access.patch

Team Nokogiri will keep on doing their best to provide security
updates in a timely manner, but if this is a concern for you and want
to use the system library instead; abort this installation process and
reinstall nokogiri as follows:

    gem install nokogiri -- --use-system-libraries
        [--with-xml2-config=/path/to/xml2-config]
        [--with-xslt-config=/path/to/xslt-config]

If you are using Bundler, tell it to use the option:

    bundle config build.nokogiri --use-system-libraries
    bundle install

Note, however, that nokogiri is not fully compatible with arbitrary
versions of libxml2 provided by OS/package vendors.
************************************************************************
Extracting libxml2-2.9.2.tar.gz into tmp/x86_64-apple-darwin15/ports/libxml2/2.9.2... OK
Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7/patches/libxml2/0001-Revert-Missing-initialization-for-the-catalog-module.patch... OK
Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7/patches/libxml2/0002-Fix-missing-entities-after-CVE-2014-3660-fix.patch... OK
Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7/patches/libxml2/0003-Stop-parsing-on-entities-boundaries-errors.patch... OK
Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7/patches/libxml2/0004-Cleanup-conditional-section-error-handling.patch... OK
Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7/patches/libxml2/0005-CVE-2015-1819-Enforce-the-reader-to-run-in-constant-.patch... OK
Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7/patches/libxml2/0006-Another-variation-of-overflow-in-Conditional-section.patch... OK
Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7/patches/libxml2/0007-Fix-an-error-in-previous-Conditional-section-patch.patch... OK
Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7/patches/libxml2/0008-CVE-2015-8035-Fix-XZ-compression-support-loop.patch... OK
Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7/patches/libxml2/0009-Updated-config.guess.patch... OK
Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7/patches/libxml2/0010-Fix-parsering-short-unclosed-comment-uninitialized-access.patch... OK
Running 'configure' for libxml2 2.9.2... OK
Running 'compile' for libxml2 2.9.2... ERROR, review '/Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7/ext/nokogiri/tmp/x86_64-apple-darwin15/ports/libxml2/2.9.2/compile.log' to see what happened. Last lines are:
========================================================================
      _xmlGzfileOpenW in libxml2.a(xmlIO.o)
      _xmlGzfileOpen_real in libxml2.a(xmlIO.o)
  "_gzopen", referenced from:
      _xmlGzfileOpenW in libxml2.a(xmlIO.o)
      _xmlGzfileOpen_real in libxml2.a(xmlIO.o)
  "_gzread", referenced from:
      _xmlGzfileRead in libxml2.a(xmlIO.o)
  "_gzwrite", referenced from:
      _xmlGzfileWrite in libxml2.a(xmlIO.o)
  "_inflate", referenced from:
      _xmlNanoHTTPRead in libxml2.a(nanohttp.o)
  "_inflateEnd", referenced from:
      _xmlNanoHTTPFreeCtxt in libxml2.a(nanohttp.o)
  "_inflateInit2_", referenced from:
      _xmlNanoHTTPScanAnswer in libxml2.a(nanohttp.o)
ld: symbol(s) not found for architecture i386
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make[2]: *** [xmllint] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all] Error 2
========================================================================
*** extconf.rb failed ***
Could not create Makefile due to some reason, probably lack of necessary
libraries and/or headers.  Check the mkmf.log file for more details.  You may
need configuration options.

Provided configuration options:
    --with-opt-dir
    --without-opt-dir
    --with-opt-include
    --without-opt-include=${opt-dir}/include
    --with-opt-lib
    --without-opt-lib=${opt-dir}/lib
    --with-make-prog
    --without-make-prog
    --srcdir=.
    --curdir
    --ruby=/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/bin/ruby
    --help
    --clean
    --use-system-libraries
    --enable-static
    --disable-static
    --with-zlib-dir
    --without-zlib-dir
    --with-zlib-include
    --without-zlib-include=${zlib-dir}/include
    --with-zlib-lib
    --without-zlib-lib=${zlib-dir}/lib
    --enable-cross-build
    --disable-cross-build
/Library/Ruby/Gems/2.0.0/gems/mini_portile2-2.0.0/lib/mini_portile2/mini_portile.rb:366:in `block in execute': Failed to complete compile task (RuntimeError)
    from /Library/Ruby/Gems/2.0.0/gems/mini_portile2-2.0.0/lib/mini_portile2/mini_portile.rb:337:in `chdir'
    from /Library/Ruby/Gems/2.0.0/gems/mini_portile2-2.0.0/lib/mini_portile2/mini_portile.rb:337:in `execute'
    from /Library/Ruby/Gems/2.0.0/gems/mini_portile2-2.0.0/lib/mini_portile2/mini_portile.rb:111:in `compile'
    from /Library/Ruby/Gems/2.0.0/gems/mini_portile2-2.0.0/lib/mini_portile2/mini_portile.rb:150:in `cook'
    from extconf.rb:289:in `block (2 levels) in process_recipe'
    from extconf.rb:182:in `block in chdir_for_build'
    from extconf.rb:181:in `chdir'
    from extconf.rb:181:in `chdir_for_build'
    from extconf.rb:288:in `block in process_recipe'
    from extconf.rb:187:in `tap'
    from extconf.rb:187:in `process_recipe'
    from extconf.rb:478:in `<main>'

To see why this extension failed to compile, please check the mkmf.log which can be found here:

  /Library/Ruby/Gems/2.0.0/extensions/universal-darwin-15/2.0.0/nokogiri-1.6.7/mkmf.log

extconf failed, exit code 1

Gem files will remain installed in /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7 for inspection.
Results logged to /Library/Ruby/Gems/2.0.0/extensions/universal-darwin-15/2.0.0/nokogiri-1.6.7/gem_make.out
VMac:beecool virvit$ uname -a
Darwin VMac.local 15.0.0 Darwin Kernel Version 15.0.0: Sat Sep 19 15:53:46 PDT 2015; root:xnu-3247.10.11~1/RELEASE_X86_64 x86_64

[bkw]

same here.

[flavorjones]

@virvit and @bkw Have you tried building with ARCHFLAGS="-arch x86_64" ?

[virvit]

Yes. No result.

19 дек. 2015 г., в 1:41, Mike Dalessio [email protected] написал(а):

@virvit and @bkw Have you tried building with ARCHFLAGS="-arch x86_64" ?

—
Reply to this email directly or view it on GitHub.

[flavorjones]

Ok, can you help us reproduce the issue? How is your machine configured?
What version of xcode are you running?
On Dec 19, 2015 1:43 AM, "virvit" [email protected] wrote:

Yes. No result.

19 дек. 2015 г., в 1:41, Mike Dalessio [email protected]
написал(а):

@virvit and @bkw Have you tried building with ARCHFLAGS="-arch x86_64" ?

—
Reply to this email directly or view it on GitHub.

—
Reply to this email directly or view it on GitHub
https://github.com/sparklemotion/nokogiri/issues/1391#issuecomment-165955230
.

[flavorjones]

Can you also confirm that you've read

http://www.nokogiri.org/tutorials/installing_nokogiri.html#mac_os_x

And followed the tips there?
On Dec 19, 2015 1:06 PM, "Mike Dalessio" mike.[email protected] wrote:

Ok, can you help us reproduce the issue? How is your machine configured?
What version of xcode are you running?
On Dec 19, 2015 1:43 AM, "virvit" [email protected] wrote:

Yes. No result.

19 дек. 2015 г., в 1:41, Mike Dalessio [email protected]
написал(а):

@virvit and @bkw Have you tried building with ARCHFLAGS="-arch x86_64" ?

—
Reply to this email directly or view it on GitHub.

—
Reply to this email directly or view it on GitHub
https://github.com/sparklemotion/nokogiri/issues/1391#issuecomment-165955230
.

[zenspider]

We can't fix things if you don't respond and answer questions.

[zenspider]

I can't reproduce this with the details above.

Added #1422 to see if we can collect a clean repro.

[alenteria]

I encountered same problem.
I fixed it with:

brew unlink xz
gem install nokogiri # or bundle install
brew link xz

from http://www.nokogiri.org/tutorials/installing_nokogiri.html#mac_os_x

[domoritz]

I'm having the same issue but unlinking xy doesn't seem to solve the problem. Do you have any suggestions that I might try? How can I help debug this issue?

[flavorjones]

@domoritz This issue is several years old, and maintainers were never able to reproduce. Can you please open a new issue and provide all the information that the bug report template requests? Thanks!