馃悰 Bug Report
The test_square_root (iris.tests.test_basic_maths.TestExponentiate) fails:
======================================================================
FAIL: test_square_root (iris.tests.test_basic_maths.TestExponentiate)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/home/alexander/Documents/PhD/reference_code/iris/lib/iris/tests/test_basic_maths.py", line 557, in test_square_root
self.assertArrayEqual(e.data, a.data ** 0.5)
File "/home/alexander/Documents/PhD/reference_code/iris/lib/iris/tests/__init__.py", line 587, in assertArrayEqual
np.testing.assert_array_equal(a, b, err_msg=err_msg)
File "/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-6/lib/python3.6/site-packages/numpy/testing/_private/ut
ils.py", line 931, in assert_array_equal
verbose=verbose, header='Arrays are not equal')
File "/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-6/lib/python3.6/site-packages/numpy/testing/_private/ut
ils.py", line 840, in assert_array_compare
raise AssertionError(msg)
AssertionError:
Arrays are not equal
Mismatched elements: 5 / 7008 (0.0713%)
Max absolute difference: 8.8817842e-16
Max relative difference: 1.96500729e-16
x: array([[2.314304, 2.314304, 2.314304, ..., 2.314304, 2.314304, 2.314304],
[2.241653, 2.243286, 2.240353, ..., 2.238803, 2.228302, 2.236692],
[2.001037, 1.921367, 1.855062, ..., 1.970571, 2.010956, 2.040697],...
y: array([[2.314304, 2.314304, 2.314304, ..., 2.314304, 2.314304, 2.314304],
[2.241653, 2.243286, 2.240353, ..., 2.238803, 2.228302, 2.236692],
[2.001037, 1.921367, 1.855062, ..., 1.970571, 2.010956, 2.040697],...
How To Reproduce
Steps to reproduce the behaviour:
- Clone the Iris repo
- Checkout 1549bae7a2e0b726745f28161d99f5dcb28a0ffd (or 343d3297b547b0837b794d8b1f60e9eb46aee34c)
- Run tests using
nox -s tests -- --verbose
Expected behaviour
No test failures.
Error log excerpts (including package versions)
Click to expand error log
nox > Running session tests-3.6
nox > Re-using existing conda env at .nox/tests-3-6.
nox > python -m pip install --no-deps --editable .
nox > conda info
active environment : iris-dev
active env location : /home/alexander/.pyenv/versions/miniconda3-latest/envs/iris-dev
user config file : /home/alexander/.condarc
populated config files : /home/alexander/.condarc
conda version : 4.9.2
conda-build version : 3.18.11
python version : 3.7.3.final.0
virtual packages : __glibc=2.31=0
__unix=0=0
__archspec=1=x86_64
base environment : /home/alexander/.pyenv/versions/miniconda3-latest (writable)
channel URLs : https://conda.anaconda.org/conda-forge/linux-64
https://conda.anaconda.org/conda-forge/noarch
https://repo.anaconda.com/pkgs/main/linux-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/linux-64
https://repo.anaconda.com/pkgs/r/noarch
package cache : /home/alexander/.pyenv/versions/miniconda3-latest/pkgs
/home/alexander/.conda/pkgs
envs directories : /home/alexander/.pyenv/versions/miniconda3-latest/envs
/home/alexander/.conda/envs
platform : linux-64
user-agent : conda/4.9.2 requests/2.21.0 CPython/3.7.3 Linux/5.4.0-65-generic ubuntu/20.04.2 glibc/2.31
UID:GID : 1000:1000
netrc file : None
offline mode : False
nox > conda list --prefix=/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-6
# packages in environment at /home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-6:
#
# Name Version Build Channel
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 1_gnu conda-forge
alabaster 0.7.12 py_0 conda-forge
antlr-python-runtime 4.7.2 py36h9f0ad1d_1002 conda-forge
appdirs 1.4.4 pyh9f0ad1d_0 conda-forge
asv 0.4.2 py36hc4f0c31_2 conda-forge
atk-1.0 2.36.0 h3371d22_4 conda-forge
babel 2.9.0 pyhd3deb0d_0 conda-forge
black 20.8b1 py_1 conda-forge
bokeh 2.1.1 py36h9f0ad1d_0 conda-forge
brotlipy 0.7.0 py36h8f6f2f9_1001 conda-forge
bzip2 1.0.8 h7f98852_4 conda-forge
c-ares 1.17.1 h36c2ea0_0 conda-forge
ca-certificates 2020.12.5 ha878542_0 conda-forge
cairo 1.16.0 h7979940_1007 conda-forge
cartopy 0.18.0 py36hb73674a_8 conda-forge
certifi 2020.12.5 py36h5fab9bb_1 conda-forge
cf-units 2.1.4 py36h68bb277_2 conda-forge
cffi 1.14.4 py36hc120d54_1 conda-forge
cfgv 3.2.0 py_0 conda-forge
cftime 1.2.1 py36h68bb277_1 conda-forge
chardet 4.0.0 py36h5fab9bb_1 conda-forge
click 7.1.2 pyh9f0ad1d_0 conda-forge
cloudpickle 1.6.0 py_0 conda-forge
colorama 0.4.4 pyh9f0ad1d_0 conda-forge
contextvars 2.4 py_0 conda-forge
cryptography 3.3.1 py36h0a59100_1 conda-forge
curl 7.71.1 he644dc0_8 conda-forge
cycler 0.10.0 py_2 conda-forge
cytoolz 0.11.0 py36h8f6f2f9_3 conda-forge
dask 2021.2.0 pyhd8ed1ab_0 conda-forge
dask-core 2021.2.0 pyhd8ed1ab_0 conda-forge
dataclasses 0.7 pyhe4b4509_6 conda-forge
dbus 1.13.6 hfdff14a_1 conda-forge
distlib 0.3.1 pyh9f0ad1d_0 conda-forge
distributed 2021.2.0 py36h5fab9bb_0 conda-forge
docutils 0.16 py36h5fab9bb_3 conda-forge
editdistance 0.5.3 py36hc4f0c31_3 conda-forge
esmf 8.0.1 mpi_mpich_h3cbecb6_102 conda-forge
esmpy 8.0.1 mpi_mpich_py36hd8aeb20_102 conda-forge
expat 2.2.10 h9c3ff4c_0 conda-forge
filelock 3.0.12 pyh9f0ad1d_0 conda-forge
flake8 3.8.4 py_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 2.001 hab24e00_0 conda-forge
font-ttf-source-code-pro 2.030 hab24e00_0 conda-forge
font-ttf-ubuntu 0.83 hab24e00_0 conda-forge
fontconfig 2.13.1 hba837de_1004 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
freetype 2.10.4 h0708190_1 conda-forge
fribidi 1.0.10 h36c2ea0_0 conda-forge
fsspec 0.8.5 pyhd8ed1ab_0 conda-forge
gdk-pixbuf 2.42.2 h0c95a7a_2 conda-forge
geos 3.8.1 he1b5a44_0 conda-forge
gettext 0.19.8.1 h0b5b191_1005 conda-forge
giflib 5.2.1 h36c2ea0_2 conda-forge
glib 2.66.6 h9c3ff4c_3 conda-forge
glib-tools 2.66.6 h9c3ff4c_3 conda-forge
graphite2 1.3.13 h58526e2_1001 conda-forge
graphviz 2.42.3 h6939c30_2 conda-forge
gst-plugins-base 1.14.5 h0935bb2_2 conda-forge
gstreamer 1.18.3 h3560a44_0 conda-forge
gtk2 2.24.33 hab0c2f8_0 conda-forge
gts 0.7.6 h64030ff_2 conda-forge
harfbuzz 2.7.4 h5cf4720_0 conda-forge
hdf4 4.2.13 h10796ff_1004 conda-forge
hdf5 1.10.6 mpi_mpich_h996c276_1014 conda-forge
heapdict 1.0.1 py_0 conda-forge
icu 68.1 h58526e2_0 conda-forge
identify 1.5.13 pyh44b312d_0 conda-forge
idna 2.10 pyh9f0ad1d_0 conda-forge
imagehash 4.2.0 pyhd8ed1ab_0 conda-forge
imagesize 1.2.0 py_0 conda-forge
immutables 0.14 py36h8f6f2f9_1 conda-forge
importlib-metadata 3.4.0 py36h5fab9bb_0 conda-forge
importlib_metadata 3.4.0 hd8ed1ab_0 conda-forge
importlib_resources 5.1.0 py36h5fab9bb_0 conda-forge
iris-sample-data 2.3.0 pyh9f0ad1d_0 conda-forge
jinja2 2.11.3 pyh44b312d_0 conda-forge
jpeg 9d h36c2ea0_0 conda-forge
kiwisolver 1.3.1 py36h605e78d_1 conda-forge
krb5 1.17.2 h926e7f8_0 conda-forge
lcms2 2.12 hddcbb42_0 conda-forge
ld_impl_linux-64 2.35.1 hea4e1c9_2 conda-forge
libblas 3.9.0 8_openblas conda-forge
libcblas 3.9.0 8_openblas conda-forge
libclang 11.0.1 default_ha53f305_1 conda-forge
libcurl 7.71.1 hcdd3856_8 conda-forge
libedit 3.1.20191231 he28a2e2_2 conda-forge
libev 4.33 h516909a_1 conda-forge
libevent 2.1.10 hcdb4288_3 conda-forge
libffi 3.3 h58526e2_2 conda-forge
libgcc-ng 9.3.0 h2828fa1_18 conda-forge
libgfortran-ng 9.3.0 hff62375_18 conda-forge
libgfortran5 9.3.0 hff62375_18 conda-forge
libglib 2.66.6 h1f3bc88_3 conda-forge
libgomp 9.3.0 h2828fa1_18 conda-forge
libiconv 1.16 h516909a_0 conda-forge
liblapack 3.9.0 8_openblas conda-forge
libllvm11 11.0.1 hf817b99_0 conda-forge
libmo_unpack 3.1.2 hf484d3e_1001 conda-forge
libnetcdf 4.7.4 mpi_mpich_hdef422e_7 conda-forge
libnghttp2 1.43.0 h812cca2_0 conda-forge
libopenblas 0.3.12 pthreads_h4812303_1 conda-forge
libpng 1.6.37 h21135ba_2 conda-forge
libpq 12.3 h255efa7_3 conda-forge
libssh2 1.9.0 hab1572f_5 conda-forge
libstdcxx-ng 9.3.0 h6de172a_18 conda-forge
libtiff 4.2.0 hdc55705_0 conda-forge
libtool 2.4.6 h58526e2_1007 conda-forge
libuuid 2.32.1 h7f98852_1000 conda-forge
libwebp 1.2.0 h3452ae3_0 conda-forge
libwebp-base 1.2.0 h7f98852_0 conda-forge
libxcb 1.13 h7f98852_1003 conda-forge
libxkbcommon 1.0.3 he3ba5ed_0 conda-forge
libxml2 2.9.10 h72842e0_3 conda-forge
locket 0.2.0 py_2 conda-forge
lz4-c 1.9.3 h9c3ff4c_0 conda-forge
markupsafe 1.1.1 py36h8f6f2f9_3 conda-forge
matplotlib 3.3.4 py36h5fab9bb_0 conda-forge
matplotlib-base 3.3.4 py36hd391965_0 conda-forge
mccabe 0.6.1 py_1 conda-forge
mo_pack 0.2.0 py36h92226af_1005 conda-forge
mpi 1.0 mpich conda-forge
mpi4py 3.0.3 py36h7b8b12a_5 conda-forge
mpich 3.4.1 h846660c_2 conda-forge
msgpack-python 1.0.2 py36h605e78d_1 conda-forge
mypy_extensions 0.4.3 py36h5fab9bb_3 conda-forge
mysql-common 8.0.22 ha770c72_3 conda-forge
mysql-libs 8.0.22 h935591d_3 conda-forge
nc-time-axis 1.2.0 py_1 conda-forge
ncurses 6.2 h58526e2_4 conda-forge
netcdf-fortran 4.5.3 mpi_mpich_h7ad8bfe_1 conda-forge
netcdf4 1.5.5.1 nompi_py36hc29086f_101 conda-forge
nodeenv 1.5.0 pyh9f0ad1d_0 conda-forge
nose 1.3.7 py_1006 conda-forge
nspr 4.29 h9c3ff4c_1 conda-forge
nss 3.61 hb5efdd6_0 conda-forge
numpy 1.19.5 py36h2aa4a07_1 conda-forge
olefile 0.46 pyh9f0ad1d_1 conda-forge
openssl 1.1.1i h7f98852_0 conda-forge
packaging 20.9 pyh44b312d_0 conda-forge
pandas 1.1.5 py36h284efc9_0 conda-forge
pango 1.42.4 h69149e4_5 conda-forge
partd 1.1.0 py_0 conda-forge
pathspec 0.8.1 pyhd3deb0d_0 conda-forge
pcre 8.44 he1b5a44_0 conda-forge
pillow 6.2.2 py36h8328e55_0 conda-forge
pip 21.0.1 pyhd8ed1ab_0 conda-forge
pixman 0.40.0 h36c2ea0_0 conda-forge
pockets 0.9.1 py_0 conda-forge
pre-commit 2.10.1 py36h5fab9bb_0 conda-forge
proj 7.2.0 he47e99f_1 conda-forge
psutil 5.8.0 py36h8f6f2f9_1 conda-forge
pthread-stubs 0.4 h36c2ea0_1001 conda-forge
pycodestyle 2.6.0 pyh9f0ad1d_0 conda-forge
pycparser 2.20 pyh9f0ad1d_2 conda-forge
pyflakes 2.2.0 pyh9f0ad1d_0 conda-forge
pygments 2.7.4 pyhd8ed1ab_0 conda-forge
pyke 1.1.1 pyhd8ed1ab_1004 conda-forge
pyopenssl 20.0.1 pyhd8ed1ab_0 conda-forge
pyparsing 2.4.7 pyh9f0ad1d_0 conda-forge
pyqt 5.12.3 py36h5fab9bb_7 conda-forge
pyqt-impl 5.12.3 py36h7ec31b9_7 conda-forge
pyqt5-sip 4.19.18 py36hc4f0c31_7 conda-forge
pyqtchart 5.12 py36h7ec31b9_7 conda-forge
pyqtwebengine 5.12.1 py36h7ec31b9_7 conda-forge
pyshp 2.1.3 pyh44b312d_0 conda-forge
pysocks 1.7.1 py36h5fab9bb_3 conda-forge
python 3.6.12 hffdb5ce_0_cpython conda-forge
python-dateutil 2.8.1 py_0 conda-forge
python-stratify 0.1.1 py36h92226af_1003 conda-forge
python-xxhash 2.0.0 py36h8f6f2f9_1 conda-forge
python_abi 3.6 1_cp36m conda-forge
pytz 2021.1 pyhd8ed1ab_0 conda-forge
pyugrid 0.3.1 py_2 conda-forge
pywavelets 1.1.1 py36h92226af_3 conda-forge
pyyaml 5.4.1 py36h8f6f2f9_0 conda-forge
qt 5.12.9 h9d6b050_2 conda-forge
readline 8.0 he28a2e2_2 conda-forge
regex 2020.11.13 py36h8f6f2f9_1 conda-forge
requests 2.25.1 pyhd3deb0d_0 conda-forge
scipy 1.5.3 py36h9e8f40b_0 conda-forge
scitools-iris 3.1.dev0 dev_0 <develop>
setuptools 49.6.0 py36h5fab9bb_3 conda-forge
shapely 1.7.1 py36h558fe5e_1 conda-forge
six 1.15.0 pyh9f0ad1d_0 conda-forge
snowballstemmer 2.1.0 pyhd8ed1ab_0 conda-forge
sortedcontainers 2.3.0 pyhd8ed1ab_0 conda-forge
sphinx 3.4.3 pyhd8ed1ab_0 conda-forge
sphinx-copybutton 0.3.1 pyhd8ed1ab_0 conda-forge
sphinx-gallery 0.8.2 pyhd8ed1ab_0 conda-forge
sphinx-panels 0.5.2 pyhd3deb0d_0 conda-forge
sphinx_rtd_theme 0.5.1 pyhd3deb0d_0 conda-forge
sphinxcontrib-applehelp 1.0.2 py_0 conda-forge
sphinxcontrib-devhelp 1.0.2 py_0 conda-forge
sphinxcontrib-htmlhelp 1.0.3 py_0 conda-forge
sphinxcontrib-jsmath 1.0.1 py_0 conda-forge
sphinxcontrib-napoleon 0.7 py_0 conda-forge
sphinxcontrib-qthelp 1.0.3 py_0 conda-forge
sphinxcontrib-serializinghtml 1.1.4 py_0 conda-forge
sqlite 3.34.0 h74cdb3f_0 conda-forge
tblib 1.6.0 py_0 conda-forge
tk 8.6.10 h21135ba_1 conda-forge
toml 0.10.2 pyhd8ed1ab_0 conda-forge
toolz 0.11.1 py_0 conda-forge
tornado 6.1 py36h8f6f2f9_1 conda-forge
typed-ast 1.4.2 py36h8f6f2f9_0 conda-forge
typing_extensions 3.7.4.3 py_0 conda-forge
udunits2 2.2.27.27 h360fe7b_0 conda-forge
urllib3 1.26.3 pyhd8ed1ab_0 conda-forge
virtualenv 20.4.2 py36h5fab9bb_0 conda-forge
wheel 0.36.2 pyhd3deb0d_0 conda-forge
xorg-kbproto 1.0.7 h7f98852_1002 conda-forge
xorg-libice 1.0.10 h516909a_0 conda-forge
xorg-libsm 1.2.3 h84519dc_1000 conda-forge
xorg-libx11 1.6.12 h516909a_0 conda-forge
xorg-libxau 1.0.9 h7f98852_0 conda-forge
xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge
xorg-libxext 1.3.4 h516909a_0 conda-forge
xorg-libxpm 3.5.13 h516909a_0 conda-forge
xorg-libxrender 0.9.10 h516909a_1002 conda-forge
xorg-libxt 1.1.5 h516909a_1003 conda-forge
xorg-renderproto 0.11.1 h14c3975_1002 conda-forge
xorg-xextproto 7.3.0 h7f98852_1002 conda-forge
xorg-xproto 7.0.31 h7f98852_1007 conda-forge
xxhash 0.8.0 h7f98852_3 conda-forge
xz 5.2.5 h516909a_1 conda-forge
yaml 0.2.5 h516909a_0 conda-forge
zict 2.0.0 py_0 conda-forge
zipp 3.4.0 py_0 conda-forge
zlib 1.2.11 h516909a_1010 conda-forge
zstd 1.4.8 ha95c52a_1 conda-forge
nox > conda list --prefix=/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-6 --explicit
# This file may be used to create an environment using:
# $ conda create --name <env> --file <this file>
# platform: linux-64
@EXPLICIT
https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2020.12.5-ha878542_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-dejavu-sans-mono-2.37-hab24e00_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-inconsolata-2.001-hab24e00_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-source-code-pro-2.030-hab24e00_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-ubuntu-0.83-hab24e00_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.35.1-hea4e1c9_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libgfortran5-9.3.0-hff62375_18.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-9.3.0-h6de172a_18.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/mpi-1.0-mpich.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/mysql-common-8.0.22-ha770c72_3.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/fonts-conda-forge-1-0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libgfortran-ng-9.3.0-hff62375_18.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libgomp-9.3.0-h2828fa1_18.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-1_gnu.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/fonts-conda-ecosystem-1-0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-9.3.0-h2828fa1_18.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-h7f98852_4.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.17.1-h36c2ea0_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/expat-2.2.10-h9c3ff4c_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/fribidi-1.0.10-h36c2ea0_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/geos-3.8.1-he1b5a44_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/giflib-5.2.1-h36c2ea0_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/graphite2-1.3.13-h58526e2_1001.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/icu-68.1-h58526e2_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/jpeg-9d-h36c2ea0_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libev-4.33-h516909a_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libffi-3.3-h58526e2_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libiconv-1.16-h516909a_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libmo_unpack-3.1.2-hf484d3e_1001.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.12-pthreads_h4812303_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libtool-2.4.6-h58526e2_1007.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libuuid-2.32.1-h7f98852_1000.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libwebp-base-1.2.0-h7f98852_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/lz4-c-1.9.3-h9c3ff4c_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/mpich-3.4.1-h846660c_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.2-h58526e2_4.tar.bz2
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https://conda.anaconda.org/conda-forge/linux-64/virtualenv-20.4.2-py36h5fab9bb_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/dask-2021.2.0-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pre-commit-2.10.1-py36h5fab9bb_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pyqt-5.12.3-py36h5fab9bb_7.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/requests-2.25.1-pyhd3deb0d_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/matplotlib-3.3.4-py36h5fab9bb_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinx-3.4.3-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinx-copybutton-0.3.1-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinx-gallery-0.8.2-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinx-panels-0.5.2-pyhd3deb0d_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinx_rtd_theme-0.5.1-pyhd3deb0d_0.tar.bz2
nox > python -m iris.tests.runner --default-tests --system-tests
Running test suite(s): system, default
Running test discovery on iris.tests.system_test with 2 processors.
Running test discovery on iris.tests with 2 processors.
system_test_imports_general (iris.tests.system_test.SystemInitialTest) ... ok
system_test_supported_filetypes (iris.tests.system_test.SystemInitialTest) ... ok
----------------------------------------------------------------------
Ran 2 tests in 0.153s
OK
test_fail_different_cs (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
test_fail_no_cs (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
test_global (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
test_global_collapse (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
Check results are independent of where the grid 'seams' are. ... ok
Check missing-data handling between different coordinate systems. ... ok
Check valid operation on a multidimensional cube. ... ok
Test area-conserving regrid between different grids. ... ok
Test area-weighted regrid on more complex area. ... ok
test_same_grid (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
Test area-conserving regrid between simple "near-square" grids. ... ok
test_invalid_clip_lengths (iris.tests.test_util.TestClipString) ... ok
...
test_oversize_string (iris.tests.test_util.TestClipString) ... ok
test_trim_string_with_no_spaces (iris.tests.test_util.TestClipString) ... ok
test_undersize_string (iris.tests.test_util.TestClipString) ... ok
test_different (iris.tests.test_util.TestDescribeDiff) ... ok
test_identical (iris.tests.test_util.TestDescribeDiff) ... ok
test_output_file (iris.tests.test_util.TestDescribeDiff) ... ok
test_monotonic_pve (iris.tests.test_util.TestMonotonic) ... ok
test_monotonic_strict (iris.tests.test_util.TestMonotonic) ... ok
test_not_monotonic (iris.tests.test_util.TestMonotonic) ... ok
test_2d_auxcoord_transpose (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_anonymous_dims (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_collapsed (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_reduce_dimensionality (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_scalar_auxcoord (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_slice (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_slice_and_transpose (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_transpose (iris.tests.test_util.TestAsCompatibleShape) ... ok
======================================================================
FAIL: test_square_root (iris.tests.test_basic_maths.TestExponentiate)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/home/alexander/Documents/PhD/reference_code/iris/lib/iris/tests/test_basic_maths.py", line 557, in test_square_root
self.assertArrayEqual(e.data, a.data ** 0.5)
File "/home/alexander/Documents/PhD/reference_code/iris/lib/iris/tests/__init__.py", line 587, in assertArrayEqual
np.testing.assert_array_equal(a, b, err_msg=err_msg)
File "/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-6/lib/python3.6/site-packages/numpy/testing/_private/utils.py", line 931, in assert_array_equal
verbose=verbose, header='Arrays are not equal')
File "/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-6/lib/python3.6/site-packages/numpy/testing/_private/utils.py", line 840, in assert_array_compare
raise AssertionError(msg)
AssertionError:
Arrays are not equal
Mismatched elements: 5 / 7008 (0.0713%)
Max absolute difference: 8.8817842e-16
Max relative difference: 1.96500729e-16
x: array([[2.314304, 2.314304, 2.314304, ..., 2.314304, 2.314304, 2.314304],
[2.241653, 2.243286, 2.240353, ..., 2.238803, 2.228302, 2.236692],
[2.001037, 1.921367, 1.855062, ..., 1.970571, 2.010956, 2.040697],...
y: array([[2.314304, 2.314304, 2.314304, ..., 2.314304, 2.314304, 2.314304],
[2.241653, 2.243286, 2.240353, ..., 2.238803, 2.228302, 2.236692],
[2.001037, 1.921367, 1.855062, ..., 1.970571, 2.010956, 2.040697],...
----------------------------------------------------------------------
Ran 5048 tests in 255.887s
FAILED (SKIP=22, failures=1)
nox > Command python -m iris.tests.runner --default-tests --system-tests failed with exit code 1
nox > Session tests-3.6 failed.
nox > Running session tests-3.7
nox > Re-using existing conda env at .nox/tests-3-7.
nox > python -m pip install --no-deps --editable .
nox > conda info
active environment : iris-dev
active env location : /home/alexander/.pyenv/versions/miniconda3-latest/envs/iris-dev
user config file : /home/alexander/.condarc
populated config files : /home/alexander/.condarc
conda version : 4.9.2
conda-build version : 3.18.11
python version : 3.7.3.final.0
virtual packages : __glibc=2.31=0
__unix=0=0
__archspec=1=x86_64
base environment : /home/alexander/.pyenv/versions/miniconda3-latest (writable)
channel URLs : https://conda.anaconda.org/conda-forge/linux-64
https://conda.anaconda.org/conda-forge/noarch
https://repo.anaconda.com/pkgs/main/linux-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/linux-64
https://repo.anaconda.com/pkgs/r/noarch
package cache : /home/alexander/.pyenv/versions/miniconda3-latest/pkgs
/home/alexander/.conda/pkgs
envs directories : /home/alexander/.pyenv/versions/miniconda3-latest/envs
/home/alexander/.conda/envs
platform : linux-64
user-agent : conda/4.9.2 requests/2.21.0 CPython/3.7.3 Linux/5.4.0-65-generic ubuntu/20.04.2 glibc/2.31
UID:GID : 1000:1000
netrc file : None
offline mode : False
nox > conda list --prefix=/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-7
# packages in environment at /home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-7:
#
# Name Version Build Channel
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 1_gnu conda-forge
alabaster 0.7.12 py_0 conda-forge
antlr-python-runtime 4.7.2 py37hc8dfbb8_1002 conda-forge
appdirs 1.4.4 pyh9f0ad1d_0 conda-forge
asv 0.4.2 py37hcd2ae1e_2 conda-forge
atk-1.0 2.36.0 h3371d22_4 conda-forge
babel 2.9.0 pyhd3deb0d_0 conda-forge
black 20.8b1 py_1 conda-forge
bokeh 2.1.1 py37hc8dfbb8_0 conda-forge
brotlipy 0.7.0 py37h5e8e339_1001 conda-forge
bzip2 1.0.8 h7f98852_4 conda-forge
c-ares 1.17.1 h36c2ea0_0 conda-forge
ca-certificates 2020.12.5 ha878542_0 conda-forge
cairo 1.16.0 h7979940_1007 conda-forge
cartopy 0.18.0 py37hba48658_8 conda-forge
certifi 2020.12.5 py37h89c1867_1 conda-forge
cf-units 2.1.4 py37h161383b_2 conda-forge
cffi 1.14.4 py37hc58025e_1 conda-forge
cfgv 3.2.0 py_0 conda-forge
cftime 1.2.1 py37h161383b_1 conda-forge
chardet 4.0.0 py37h89c1867_1 conda-forge
click 7.1.2 pyh9f0ad1d_0 conda-forge
cloudpickle 1.6.0 py_0 conda-forge
colorama 0.4.4 pyh9f0ad1d_0 conda-forge
cryptography 3.3.1 py37h7f0c10b_1 conda-forge
curl 7.71.1 he644dc0_8 conda-forge
cycler 0.10.0 py_2 conda-forge
cytoolz 0.11.0 py37h5e8e339_3 conda-forge
dask 2021.2.0 pyhd8ed1ab_0 conda-forge
dask-core 2021.2.0 pyhd8ed1ab_0 conda-forge
dataclasses 0.7 pyhb2cacf7_7 conda-forge
dbus 1.13.6 hfdff14a_1 conda-forge
distlib 0.3.1 pyh9f0ad1d_0 conda-forge
distributed 2021.2.0 py37h89c1867_0 conda-forge
docutils 0.16 py37h89c1867_3 conda-forge
editdistance 0.5.3 py37hcd2ae1e_3 conda-forge
esmf 8.0.1 mpi_mpich_h3cbecb6_102 conda-forge
esmpy 8.0.1 mpi_mpich_py37ha4619bd_102 conda-forge
expat 2.2.10 h9c3ff4c_0 conda-forge
filelock 3.0.12 pyh9f0ad1d_0 conda-forge
flake8 3.8.4 py_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 2.001 hab24e00_0 conda-forge
font-ttf-source-code-pro 2.030 hab24e00_0 conda-forge
font-ttf-ubuntu 0.83 hab24e00_0 conda-forge
fontconfig 2.13.1 hba837de_1004 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
freetype 2.10.4 h0708190_1 conda-forge
fribidi 1.0.10 h36c2ea0_0 conda-forge
fsspec 0.8.5 pyhd8ed1ab_0 conda-forge
gdk-pixbuf 2.42.2 h0c95a7a_2 conda-forge
geos 3.8.1 he1b5a44_0 conda-forge
gettext 0.19.8.1 h0b5b191_1005 conda-forge
giflib 5.2.1 h36c2ea0_2 conda-forge
glib 2.66.6 h9c3ff4c_3 conda-forge
glib-tools 2.66.6 h9c3ff4c_3 conda-forge
graphite2 1.3.13 h58526e2_1001 conda-forge
graphviz 2.42.3 h6939c30_2 conda-forge
gst-plugins-base 1.14.5 h0935bb2_2 conda-forge
gstreamer 1.18.3 h3560a44_0 conda-forge
gtk2 2.24.33 hab0c2f8_0 conda-forge
gts 0.7.6 h64030ff_2 conda-forge
harfbuzz 2.7.4 h5cf4720_0 conda-forge
hdf4 4.2.13 h10796ff_1004 conda-forge
hdf5 1.10.6 mpi_mpich_h996c276_1014 conda-forge
heapdict 1.0.1 py_0 conda-forge
icu 68.1 h58526e2_0 conda-forge
identify 1.5.13 pyh44b312d_0 conda-forge
idna 2.10 pyh9f0ad1d_0 conda-forge
imagehash 4.2.0 pyhd8ed1ab_0 conda-forge
imagesize 1.2.0 py_0 conda-forge
importlib-metadata 3.4.0 py37h89c1867_0 conda-forge
importlib_metadata 3.4.0 hd8ed1ab_0 conda-forge
iris-sample-data 2.3.0 pyh9f0ad1d_0 conda-forge
jinja2 2.11.3 pyh44b312d_0 conda-forge
jpeg 9d h36c2ea0_0 conda-forge
kiwisolver 1.3.1 py37h2527ec5_1 conda-forge
krb5 1.17.2 h926e7f8_0 conda-forge
lcms2 2.12 hddcbb42_0 conda-forge
ld_impl_linux-64 2.35.1 hea4e1c9_2 conda-forge
libblas 3.9.0 8_openblas conda-forge
libcblas 3.9.0 8_openblas conda-forge
libclang 11.0.1 default_ha53f305_1 conda-forge
libcurl 7.71.1 hcdd3856_8 conda-forge
libedit 3.1.20191231 he28a2e2_2 conda-forge
libev 4.33 h516909a_1 conda-forge
libevent 2.1.10 hcdb4288_3 conda-forge
libffi 3.3 h58526e2_2 conda-forge
libgcc-ng 9.3.0 h2828fa1_18 conda-forge
libgfortran-ng 9.3.0 hff62375_18 conda-forge
libgfortran5 9.3.0 hff62375_18 conda-forge
libglib 2.66.6 h1f3bc88_3 conda-forge
libgomp 9.3.0 h2828fa1_18 conda-forge
libiconv 1.16 h516909a_0 conda-forge
liblapack 3.9.0 8_openblas conda-forge
libllvm11 11.0.1 hf817b99_0 conda-forge
libmo_unpack 3.1.2 hf484d3e_1001 conda-forge
libnetcdf 4.7.4 mpi_mpich_hdef422e_7 conda-forge
libnghttp2 1.43.0 h812cca2_0 conda-forge
libopenblas 0.3.12 pthreads_h4812303_1 conda-forge
libpng 1.6.37 h21135ba_2 conda-forge
libpq 12.3 h255efa7_3 conda-forge
libssh2 1.9.0 hab1572f_5 conda-forge
libstdcxx-ng 9.3.0 h6de172a_18 conda-forge
libtiff 4.2.0 hdc55705_0 conda-forge
libtool 2.4.6 h58526e2_1007 conda-forge
libuuid 2.32.1 h7f98852_1000 conda-forge
libwebp 1.2.0 h3452ae3_0 conda-forge
libwebp-base 1.2.0 h7f98852_0 conda-forge
libxcb 1.13 h7f98852_1003 conda-forge
libxkbcommon 1.0.3 he3ba5ed_0 conda-forge
libxml2 2.9.10 h72842e0_3 conda-forge
locket 0.2.0 py_2 conda-forge
lz4-c 1.9.3 h9c3ff4c_0 conda-forge
markupsafe 1.1.1 py37h5e8e339_3 conda-forge
matplotlib 3.3.4 py37h89c1867_0 conda-forge
matplotlib-base 3.3.4 py37h0c9df89_0 conda-forge
mccabe 0.6.1 py_1 conda-forge
mo_pack 0.2.0 py37h902c9e0_1005 conda-forge
mpi 1.0 mpich conda-forge
mpi4py 3.0.3 py37h1e5cb63_5 conda-forge
mpich 3.4.1 h846660c_2 conda-forge
msgpack-python 1.0.2 py37h2527ec5_1 conda-forge
mypy_extensions 0.4.3 py37h89c1867_3 conda-forge
mysql-common 8.0.22 ha770c72_3 conda-forge
mysql-libs 8.0.22 h935591d_3 conda-forge
nc-time-axis 1.2.0 py_1 conda-forge
ncurses 6.2 h58526e2_4 conda-forge
netcdf-fortran 4.5.3 mpi_mpich_h7ad8bfe_1 conda-forge
netcdf4 1.5.5.1 nompi_py37hdbee05a_101 conda-forge
nodeenv 1.5.0 pyh9f0ad1d_0 conda-forge
nose 1.3.7 py_1006 conda-forge
nspr 4.29 h9c3ff4c_1 conda-forge
nss 3.61 hb5efdd6_0 conda-forge
numpy 1.20.0 py37haa41c4c_0 conda-forge
olefile 0.46 pyh9f0ad1d_1 conda-forge
openssl 1.1.1i h7f98852_0 conda-forge
packaging 20.9 pyh44b312d_0 conda-forge
pandas 1.2.2 py37hdc94413_0 conda-forge
pango 1.42.4 h69149e4_5 conda-forge
partd 1.1.0 py_0 conda-forge
pathspec 0.8.1 pyhd3deb0d_0 conda-forge
pcre 8.44 he1b5a44_0 conda-forge
pillow 6.2.2 py37h718be6c_0 conda-forge
pip 21.0.1 pyhd8ed1ab_0 conda-forge
pixman 0.40.0 h36c2ea0_0 conda-forge
pockets 0.9.1 py_0 conda-forge
pre-commit 2.10.1 py37h89c1867_0 conda-forge
proj 7.2.0 he47e99f_1 conda-forge
psutil 5.8.0 py37h5e8e339_1 conda-forge
pthread-stubs 0.4 h36c2ea0_1001 conda-forge
pycodestyle 2.6.0 pyh9f0ad1d_0 conda-forge
pycparser 2.20 pyh9f0ad1d_2 conda-forge
pyflakes 2.2.0 pyh9f0ad1d_0 conda-forge
pygments 2.7.4 pyhd8ed1ab_0 conda-forge
pyke 1.1.1 pyhd8ed1ab_1004 conda-forge
pyopenssl 20.0.1 pyhd8ed1ab_0 conda-forge
pyparsing 2.4.7 pyh9f0ad1d_0 conda-forge
pyqt 5.12.3 py37h89c1867_7 conda-forge
pyqt-impl 5.12.3 py37he336c9b_7 conda-forge
pyqt5-sip 4.19.18 py37hcd2ae1e_7 conda-forge
pyqtchart 5.12 py37he336c9b_7 conda-forge
pyqtwebengine 5.12.1 py37he336c9b_7 conda-forge
pyshp 2.1.3 pyh44b312d_0 conda-forge
pysocks 1.7.1 py37h89c1867_3 conda-forge
python 3.7.9 hffdb5ce_0_cpython conda-forge
python-dateutil 2.8.1 py_0 conda-forge
python-stratify 0.1.1 py37h902c9e0_1003 conda-forge
python-xxhash 2.0.0 py37h5e8e339_1 conda-forge
python_abi 3.7 1_cp37m conda-forge
pytz 2021.1 pyhd8ed1ab_0 conda-forge
pyugrid 0.3.1 py_2 conda-forge
pywavelets 1.1.1 py37h902c9e0_3 conda-forge
pyyaml 5.4.1 py37h5e8e339_0 conda-forge
qt 5.12.9 h9d6b050_2 conda-forge
readline 8.0 he28a2e2_2 conda-forge
regex 2020.11.13 py37h5e8e339_1 conda-forge
requests 2.25.1 pyhd3deb0d_0 conda-forge
scipy 1.6.0 py37h14a347d_0 conda-forge
scitools-iris 3.1.dev0 dev_0 <develop>
setuptools 49.6.0 py37h89c1867_3 conda-forge
shapely 1.7.1 py37hba0730f_1 conda-forge
six 1.15.0 pyh9f0ad1d_0 conda-forge
snowballstemmer 2.1.0 pyhd8ed1ab_0 conda-forge
sortedcontainers 2.3.0 pyhd8ed1ab_0 conda-forge
sphinx 3.4.3 pyhd8ed1ab_0 conda-forge
sphinx-copybutton 0.3.1 pyhd8ed1ab_0 conda-forge
sphinx-gallery 0.8.2 pyhd8ed1ab_0 conda-forge
sphinx-panels 0.5.2 pyhd3deb0d_0 conda-forge
sphinx_rtd_theme 0.5.1 pyhd3deb0d_0 conda-forge
sphinxcontrib-applehelp 1.0.2 py_0 conda-forge
sphinxcontrib-devhelp 1.0.2 py_0 conda-forge
sphinxcontrib-htmlhelp 1.0.3 py_0 conda-forge
sphinxcontrib-jsmath 1.0.1 py_0 conda-forge
sphinxcontrib-napoleon 0.7 py_0 conda-forge
sphinxcontrib-qthelp 1.0.3 py_0 conda-forge
sphinxcontrib-serializinghtml 1.1.4 py_0 conda-forge
sqlite 3.34.0 h74cdb3f_0 conda-forge
tblib 1.6.0 py_0 conda-forge
tk 8.6.10 h21135ba_1 conda-forge
toml 0.10.2 pyhd8ed1ab_0 conda-forge
toolz 0.11.1 py_0 conda-forge
tornado 6.1 py37h5e8e339_1 conda-forge
typed-ast 1.4.2 py37h5e8e339_0 conda-forge
typing_extensions 3.7.4.3 py_0 conda-forge
udunits2 2.2.27.27 h360fe7b_0 conda-forge
urllib3 1.26.3 pyhd8ed1ab_0 conda-forge
virtualenv 20.4.2 py37h89c1867_0 conda-forge
wheel 0.36.2 pyhd3deb0d_0 conda-forge
xorg-kbproto 1.0.7 h7f98852_1002 conda-forge
xorg-libice 1.0.10 h516909a_0 conda-forge
xorg-libsm 1.2.3 h84519dc_1000 conda-forge
xorg-libx11 1.6.12 h516909a_0 conda-forge
xorg-libxau 1.0.9 h7f98852_0 conda-forge
xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge
xorg-libxext 1.3.4 h516909a_0 conda-forge
xorg-libxpm 3.5.13 h516909a_0 conda-forge
xorg-libxrender 0.9.10 h516909a_1002 conda-forge
xorg-libxt 1.1.5 h516909a_1003 conda-forge
xorg-renderproto 0.11.1 h14c3975_1002 conda-forge
xorg-xextproto 7.3.0 h7f98852_1002 conda-forge
xorg-xproto 7.0.31 h7f98852_1007 conda-forge
xxhash 0.8.0 h7f98852_3 conda-forge
xz 5.2.5 h516909a_1 conda-forge
yaml 0.2.5 h516909a_0 conda-forge
zict 2.0.0 py_0 conda-forge
zipp 3.4.0 py_0 conda-forge
zlib 1.2.11 h516909a_1010 conda-forge
zstd 1.4.8 ha95c52a_1 conda-forge
nox > conda list --prefix=/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-7 --explicit
# This file may be used to create an environment using:
# $ conda create --name <env> --file <this file>
# platform: linux-64
@EXPLICIT
https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2020.12.5-ha878542_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-dejavu-sans-mono-2.37-hab24e00_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-inconsolata-2.001-hab24e00_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-source-code-pro-2.030-hab24e00_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-ubuntu-0.83-hab24e00_0.tar.bz2
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https://conda.anaconda.org/conda-forge/linux-64/setuptools-49.6.0-py37h89c1867_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/shapely-1.7.1-py37hba0730f_1.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinxcontrib-napoleon-0.7-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/virtualenv-20.4.2-py37h89c1867_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/asv-0.4.2-py37hcd2ae1e_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/cf-units-2.1.4-py37h161383b_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/distributed-2021.2.0-py37h89c1867_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/esmf-8.0.1-mpi_mpich_h3cbecb6_102.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/flake8-3.8.4-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/gtk2-2.24.33-hab0c2f8_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/imagehash-4.2.0-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/jinja2-2.11.3-pyh44b312d_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/matplotlib-base-3.3.4-py37h0c9df89_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/netcdf4-1.5.5.1-nompi_py37hdbee05a_101.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/nodeenv-1.5.0-pyh9f0ad1d_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pip-21.0.1-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pygments-2.7.4-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pyopenssl-20.0.1-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pyqt-impl-5.12.3-py37he336c9b_7.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/bokeh-2.1.1-py37hc8dfbb8_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/cartopy-0.18.0-py37hba48658_8.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/esmpy-8.0.1-mpi_mpich_py37ha4619bd_102.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/graphviz-2.42.3-h6939c30_2.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/nc-time-axis-1.2.0-py_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pre-commit-2.10.1-py37h89c1867_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pyqtchart-5.12-py37he336c9b_7.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pyqtwebengine-5.12.1-py37he336c9b_7.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pyugrid-0.3.1-py_2.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/urllib3-1.26.3-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/dask-2021.2.0-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pyqt-5.12.3-py37h89c1867_7.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/requests-2.25.1-pyhd3deb0d_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/matplotlib-3.3.4-py37h89c1867_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinx-3.4.3-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinx-copybutton-0.3.1-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinx-gallery-0.8.2-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinx-panels-0.5.2-pyhd3deb0d_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinx_rtd_theme-0.5.1-pyhd3deb0d_0.tar.bz2
nox > python -m iris.tests.runner --default-tests --system-tests
Running test suite(s): system, default
Running test discovery on iris.tests.system_test with 2 processors.
Running test discovery on iris.tests with 2 processors.
system_test_imports_general (iris.tests.system_test.SystemInitialTest) ... ok
system_test_supported_filetypes (iris.tests.system_test.SystemInitialTest) ... ok
----------------------------------------------------------------------
Ran 2 tests in 0.139s
OK
test_fail_different_cs (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
test_fail_no_cs (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
test_global (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
test_global_collapse (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
Check results are independent of where the grid 'seams' are. ... ok
Check missing-data handling between different coordinate systems. ... ok
Check valid operation on a multidimensional cube. ... ok
Test area-conserving regrid between different grids. ... ok
Test area-weighted regrid on more complex area. ... ok
test_same_grid (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
Test area-conserving regrid between simple "near-square" grids. ... ok
Check for missing data handling. ... ok
test_single_cells (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
test_xy_transposed (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
test_ugrid (iris.tests.experimental.ugrid.test_ugrid.TestUgrid) ... ok
test_cube_animation (iris.tests.experimental.test_animate.IntegrationTest) ... ok
test_inverted (iris.tests.experimental.test_raster.TestGeoTiffExport) ... SKIP: Test requires 'gdal'.
test_masked (iris.tests.experimental.test_raster.TestGeoTiffExport) ... SKIP: Test requires 'gdal'.
test_unmasked (iris.tests.experimental.test_raster.TestGeoTiffExport) ... SKIP: Test requires 'gdal'.
test_monotonic_pve (iris.tests.test_util.TestMonotonic) ... ok
...
test_monotonic_strict (iris.tests.test_util.TestMonotonic) ... ok
test_not_monotonic (iris.tests.test_util.TestMonotonic) ... ok
test_2d_auxcoord_transpose (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_anonymous_dims (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_collapsed (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_reduce_dimensionality (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_scalar_auxcoord (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_slice (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_slice_and_transpose (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_transpose (iris.tests.test_util.TestAsCompatibleShape) ... ok
======================================================================
FAIL: test_self_referencing_load_issue_3367 (iris.tests.integration.test_netcdf.TestSelfReferencingVarLoad)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/home/alexander/Documents/PhD/reference_code/iris/lib/iris/tests/integration/test_netcdf.py", line 405, in test_self_referencing_load_issue_3367
warn.assert_called_with(expected_msg)
File "/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-7/lib/python3.7/unittest/mock.py", line 878, in assert_called_with
raise AssertionError(_error_message()) from cause
AssertionError: Expected call: warn("Missing CF-netCDF measure variable 'areacello', referenced by netCDF variable 'volcello'")
Actual call: warn('`np.bool` is a deprecated alias for the builtin `bool`. To silence this warning, use `bool` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.bool_` here.\nDeprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations', <class 'DeprecationWarning'>, stacklevel=2)
======================================================================
FAIL: test_square_root (iris.tests.test_basic_maths.TestExponentiate)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/home/alexander/Documents/PhD/reference_code/iris/lib/iris/tests/test_basic_maths.py", line 557, in test_square_root
self.assertArrayEqual(e.data, a.data ** 0.5)
File "/home/alexander/Documents/PhD/reference_code/iris/lib/iris/tests/__init__.py", line 587, in assertArrayEqual
np.testing.assert_array_equal(a, b, err_msg=err_msg)
File "/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-7/lib/python3.7/site-packages/numpy/testing/_private/utils.py", line 933, in assert_array_equal
verbose=verbose, header='Arrays are not equal')
File "/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-7/lib/python3.7/site-packages/numpy/testing/_private/utils.py", line 842, in assert_array_compare
raise AssertionError(msg)
AssertionError:
Arrays are not equal
Mismatched elements: 5 / 7008 (0.0713%)
Max absolute difference: 8.8817842e-16
Max relative difference: 1.96500729e-16
x: array([[2.314304, 2.314304, 2.314304, ..., 2.314304, 2.314304, 2.314304],
[2.241653, 2.243286, 2.240353, ..., 2.238803, 2.228302, 2.236692],
[2.001037, 1.921367, 1.855062, ..., 1.970571, 2.010956, 2.040697],...
y: array([[2.314304, 2.314304, 2.314304, ..., 2.314304, 2.314304, 2.314304],
[2.241653, 2.243286, 2.240353, ..., 2.238803, 2.228302, 2.236692],
[2.001037, 1.921367, 1.855062, ..., 1.970571, 2.010956, 2.040697],...
----------------------------------------------------------------------
Ran 5048 tests in 247.580s
FAILED (SKIP=22, failures=2)
nox > Command python -m iris.tests.runner --default-tests --system-tests failed with exit code 1
nox > Session tests-3.7 failed.
nox > Running session tests-3.8
nox > Re-using existing conda env at .nox/tests-3-8.
nox > python -m pip install --no-deps --editable .
nox > conda info
active environment : iris-dev
active env location : /home/alexander/.pyenv/versions/miniconda3-latest/envs/iris-dev
user config file : /home/alexander/.condarc
populated config files : /home/alexander/.condarc
conda version : 4.9.2
conda-build version : 3.18.11
python version : 3.7.3.final.0
virtual packages : __glibc=2.31=0
__unix=0=0
__archspec=1=x86_64
base environment : /home/alexander/.pyenv/versions/miniconda3-latest (writable)
channel URLs : https://conda.anaconda.org/conda-forge/linux-64
https://conda.anaconda.org/conda-forge/noarch
https://repo.anaconda.com/pkgs/main/linux-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/linux-64
https://repo.anaconda.com/pkgs/r/noarch
package cache : /home/alexander/.pyenv/versions/miniconda3-latest/pkgs
/home/alexander/.conda/pkgs
envs directories : /home/alexander/.pyenv/versions/miniconda3-latest/envs
/home/alexander/.conda/envs
platform : linux-64
user-agent : conda/4.9.2 requests/2.21.0 CPython/3.7.3 Linux/5.4.0-65-generic ubuntu/20.04.2 glibc/2.31
UID:GID : 1000:1000
netrc file : None
offline mode : False
nox > conda list --prefix=/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-8
# packages in environment at /home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-8:
#
# Name Version Build Channel
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 1_gnu conda-forge
alabaster 0.7.12 py_0 conda-forge
antlr-python-runtime 4.7.2 py38h32f6830_1002 conda-forge
appdirs 1.4.4 pyh9f0ad1d_0 conda-forge
asv 0.4.2 py38h709712a_2 conda-forge
atk-1.0 2.36.0 h3371d22_4 conda-forge
babel 2.9.0 pyhd3deb0d_0 conda-forge
black 20.8b1 py_1 conda-forge
bokeh 2.1.1 py38h32f6830_0 conda-forge
brotlipy 0.7.0 py38h497a2fe_1001 conda-forge
bzip2 1.0.8 h7f98852_4 conda-forge
c-ares 1.17.1 h36c2ea0_0 conda-forge
ca-certificates 2020.12.5 ha878542_0 conda-forge
cairo 1.16.0 h7979940_1007 conda-forge
cartopy 0.18.0 py38h9b98833_8 conda-forge
certifi 2020.12.5 py38h578d9bd_1 conda-forge
cf-units 2.1.4 py38hab2c0dc_2 conda-forge
cffi 1.14.4 py38ha65f79e_1 conda-forge
cfgv 3.2.0 py_0 conda-forge
cftime 1.2.1 py38hab2c0dc_1 conda-forge
chardet 4.0.0 py38h578d9bd_1 conda-forge
click 7.1.2 pyh9f0ad1d_0 conda-forge
cloudpickle 1.6.0 py_0 conda-forge
colorama 0.4.4 pyh9f0ad1d_0 conda-forge
cryptography 3.3.1 py38h2b97feb_1 conda-forge
curl 7.71.1 he644dc0_8 conda-forge
cycler 0.10.0 py_2 conda-forge
cytoolz 0.11.0 py38h497a2fe_3 conda-forge
dask 2021.2.0 pyhd8ed1ab_0 conda-forge
dask-core 2021.2.0 pyhd8ed1ab_0 conda-forge
dataclasses 0.7 pyhb2cacf7_7 conda-forge
dbus 1.13.6 hfdff14a_1 conda-forge
distlib 0.3.1 pyh9f0ad1d_0 conda-forge
distributed 2021.2.0 py38h578d9bd_0 conda-forge
docutils 0.16 py38h578d9bd_3 conda-forge
editdistance 0.5.3 py38h709712a_3 conda-forge
esmf 8.0.1 mpi_mpich_h3cbecb6_102 conda-forge
esmpy 8.0.1 mpi_mpich_py38h6f0bf2d_102 conda-forge
expat 2.2.10 h9c3ff4c_0 conda-forge
filelock 3.0.12 pyh9f0ad1d_0 conda-forge
flake8 3.8.4 py_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 2.001 hab24e00_0 conda-forge
font-ttf-source-code-pro 2.030 hab24e00_0 conda-forge
font-ttf-ubuntu 0.83 hab24e00_0 conda-forge
fontconfig 2.13.1 hba837de_1004 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
freetype 2.10.4 h0708190_1 conda-forge
fribidi 1.0.10 h36c2ea0_0 conda-forge
fsspec 0.8.5 pyhd8ed1ab_0 conda-forge
gdk-pixbuf 2.42.2 h0c95a7a_2 conda-forge
geos 3.8.1 he1b5a44_0 conda-forge
gettext 0.19.8.1 h0b5b191_1005 conda-forge
giflib 5.2.1 h36c2ea0_2 conda-forge
glib 2.66.6 h9c3ff4c_3 conda-forge
glib-tools 2.66.6 h9c3ff4c_3 conda-forge
graphite2 1.3.13 h58526e2_1001 conda-forge
graphviz 2.42.3 h6939c30_2 conda-forge
gst-plugins-base 1.14.5 h0935bb2_2 conda-forge
gstreamer 1.18.3 h3560a44_0 conda-forge
gtk2 2.24.33 hab0c2f8_0 conda-forge
gts 0.7.6 h64030ff_2 conda-forge
harfbuzz 2.7.4 h5cf4720_0 conda-forge
hdf4 4.2.13 h10796ff_1004 conda-forge
hdf5 1.10.6 mpi_mpich_h996c276_1014 conda-forge
heapdict 1.0.1 py_0 conda-forge
icu 68.1 h58526e2_0 conda-forge
identify 1.5.13 pyh44b312d_0 conda-forge
idna 2.10 pyh9f0ad1d_0 conda-forge
imagehash 4.2.0 pyhd8ed1ab_0 conda-forge
imagesize 1.2.0 py_0 conda-forge
importlib-metadata 3.4.0 py38h578d9bd_0 conda-forge
iris-sample-data 2.3.0 pyh9f0ad1d_0 conda-forge
jinja2 2.11.3 pyh44b312d_0 conda-forge
jpeg 9d h36c2ea0_0 conda-forge
kiwisolver 1.3.1 py38h1fd1430_1 conda-forge
krb5 1.17.2 h926e7f8_0 conda-forge
lcms2 2.12 hddcbb42_0 conda-forge
ld_impl_linux-64 2.35.1 hea4e1c9_2 conda-forge
libblas 3.9.0 8_openblas conda-forge
libcblas 3.9.0 8_openblas conda-forge
libclang 11.0.1 default_ha53f305_1 conda-forge
libcurl 7.71.1 hcdd3856_8 conda-forge
libedit 3.1.20191231 he28a2e2_2 conda-forge
libev 4.33 h516909a_1 conda-forge
libevent 2.1.10 hcdb4288_3 conda-forge
libffi 3.3 h58526e2_2 conda-forge
libgcc-ng 9.3.0 h2828fa1_18 conda-forge
libgfortran-ng 9.3.0 hff62375_18 conda-forge
libgfortran5 9.3.0 hff62375_18 conda-forge
libglib 2.66.6 h1f3bc88_3 conda-forge
libgomp 9.3.0 h2828fa1_18 conda-forge
libiconv 1.16 h516909a_0 conda-forge
liblapack 3.9.0 8_openblas conda-forge
libllvm11 11.0.1 hf817b99_0 conda-forge
libmo_unpack 3.1.2 hf484d3e_1001 conda-forge
libnetcdf 4.7.4 mpi_mpich_hdef422e_7 conda-forge
libnghttp2 1.43.0 h812cca2_0 conda-forge
libopenblas 0.3.12 pthreads_h4812303_1 conda-forge
libpng 1.6.37 h21135ba_2 conda-forge
libpq 12.3 h255efa7_3 conda-forge
libssh2 1.9.0 hab1572f_5 conda-forge
libstdcxx-ng 9.3.0 h6de172a_18 conda-forge
libtiff 4.2.0 hdc55705_0 conda-forge
libtool 2.4.6 h58526e2_1007 conda-forge
libuuid 2.32.1 h7f98852_1000 conda-forge
libwebp 1.2.0 h3452ae3_0 conda-forge
libwebp-base 1.2.0 h7f98852_0 conda-forge
libxcb 1.13 h7f98852_1003 conda-forge
libxkbcommon 1.0.3 he3ba5ed_0 conda-forge
libxml2 2.9.10 h72842e0_3 conda-forge
locket 0.2.0 py_2 conda-forge
lz4-c 1.9.3 h9c3ff4c_0 conda-forge
markupsafe 1.1.1 py38h497a2fe_3 conda-forge
matplotlib 3.3.4 py38h578d9bd_0 conda-forge
matplotlib-base 3.3.4 py38h0efea84_0 conda-forge
mccabe 0.6.1 py_1 conda-forge
mo_pack 0.2.0 py38h5c078b8_1005 conda-forge
mpi 1.0 mpich conda-forge
mpi4py 3.0.3 py38he865349_5 conda-forge
mpich 3.4.1 h846660c_2 conda-forge
msgpack-python 1.0.2 py38h1fd1430_1 conda-forge
mypy_extensions 0.4.3 py38h578d9bd_3 conda-forge
mysql-common 8.0.22 ha770c72_3 conda-forge
mysql-libs 8.0.22 h935591d_3 conda-forge
nc-time-axis 1.2.0 py_1 conda-forge
ncurses 6.2 h58526e2_4 conda-forge
netcdf-fortran 4.5.3 mpi_mpich_h7ad8bfe_1 conda-forge
netcdf4 1.5.5.1 nompi_py38h1cdf482_101 conda-forge
nodeenv 1.5.0 pyh9f0ad1d_0 conda-forge
nose 1.3.7 py_1006 conda-forge
nspr 4.29 h9c3ff4c_1 conda-forge
nss 3.61 hb5efdd6_0 conda-forge
numpy 1.20.0 py38h18fd61f_0 conda-forge
olefile 0.46 pyh9f0ad1d_1 conda-forge
openssl 1.1.1i h7f98852_0 conda-forge
packaging 20.9 pyh44b312d_0 conda-forge
pandas 1.2.2 py38h51da96c_0 conda-forge
pango 1.42.4 h69149e4_5 conda-forge
partd 1.1.0 py_0 conda-forge
pathspec 0.8.1 pyhd3deb0d_0 conda-forge
pcre 8.44 he1b5a44_0 conda-forge
pillow 6.2.2 py38h9776b28_0 conda-forge
pip 21.0.1 pyhd8ed1ab_0 conda-forge
pixman 0.40.0 h36c2ea0_0 conda-forge
pockets 0.9.1 py_0 conda-forge
pre-commit 2.10.1 py38h578d9bd_0 conda-forge
proj 7.2.0 he47e99f_1 conda-forge
psutil 5.8.0 py38h497a2fe_1 conda-forge
pthread-stubs 0.4 h36c2ea0_1001 conda-forge
pycodestyle 2.6.0 pyh9f0ad1d_0 conda-forge
pycparser 2.20 pyh9f0ad1d_2 conda-forge
pyflakes 2.2.0 pyh9f0ad1d_0 conda-forge
pygments 2.7.4 pyhd8ed1ab_0 conda-forge
pyke 1.1.1 pyhd8ed1ab_1004 conda-forge
pyopenssl 20.0.1 pyhd8ed1ab_0 conda-forge
pyparsing 2.4.7 pyh9f0ad1d_0 conda-forge
pyqt 5.12.3 py38h578d9bd_7 conda-forge
pyqt-impl 5.12.3 py38h7400c14_7 conda-forge
pyqt5-sip 4.19.18 py38h709712a_7 conda-forge
pyqtchart 5.12 py38h7400c14_7 conda-forge
pyqtwebengine 5.12.1 py38h7400c14_7 conda-forge
pyshp 2.1.3 pyh44b312d_0 conda-forge
pysocks 1.7.1 py38h578d9bd_3 conda-forge
python 3.8.6 hffdb5ce_5_cpython conda-forge
python-dateutil 2.8.1 py_0 conda-forge
python-stratify 0.1.1 py38h5c078b8_1003 conda-forge
python-xxhash 2.0.0 py38h497a2fe_1 conda-forge
python_abi 3.8 1_cp38 conda-forge
pytz 2021.1 pyhd8ed1ab_0 conda-forge
pyugrid 0.3.1 py_2 conda-forge
pywavelets 1.1.1 py38h5c078b8_3 conda-forge
pyyaml 5.4.1 py38h497a2fe_0 conda-forge
qt 5.12.9 h9d6b050_2 conda-forge
readline 8.0 he28a2e2_2 conda-forge
regex 2020.11.13 py38h497a2fe_1 conda-forge
requests 2.25.1 pyhd3deb0d_0 conda-forge
scipy 1.6.0 py38hb2138dd_0 conda-forge
scitools-iris 3.1.dev0 dev_0 <develop>
setuptools 49.6.0 py38h578d9bd_3 conda-forge
shapely 1.7.1 py38ha11d057_1 conda-forge
six 1.15.0 pyh9f0ad1d_0 conda-forge
snowballstemmer 2.1.0 pyhd8ed1ab_0 conda-forge
sortedcontainers 2.3.0 pyhd8ed1ab_0 conda-forge
sphinx 3.4.3 pyhd8ed1ab_0 conda-forge
sphinx-copybutton 0.3.1 pyhd8ed1ab_0 conda-forge
sphinx-gallery 0.8.2 pyhd8ed1ab_0 conda-forge
sphinx-panels 0.5.2 pyhd3deb0d_0 conda-forge
sphinx_rtd_theme 0.5.1 pyhd3deb0d_0 conda-forge
sphinxcontrib-applehelp 1.0.2 py_0 conda-forge
sphinxcontrib-devhelp 1.0.2 py_0 conda-forge
sphinxcontrib-htmlhelp 1.0.3 py_0 conda-forge
sphinxcontrib-jsmath 1.0.1 py_0 conda-forge
sphinxcontrib-napoleon 0.7 py_0 conda-forge
sphinxcontrib-qthelp 1.0.3 py_0 conda-forge
sphinxcontrib-serializinghtml 1.1.4 py_0 conda-forge
sqlite 3.34.0 h74cdb3f_0 conda-forge
tblib 1.6.0 py_0 conda-forge
tk 8.6.10 h21135ba_1 conda-forge
toml 0.10.2 pyhd8ed1ab_0 conda-forge
toolz 0.11.1 py_0 conda-forge
tornado 6.1 py38h497a2fe_1 conda-forge
typed-ast 1.4.2 py38h497a2fe_0 conda-forge
typing_extensions 3.7.4.3 py_0 conda-forge
udunits2 2.2.27.27 h360fe7b_0 conda-forge
urllib3 1.26.3 pyhd8ed1ab_0 conda-forge
virtualenv 20.4.2 py38h578d9bd_0 conda-forge
wheel 0.36.2 pyhd3deb0d_0 conda-forge
xorg-kbproto 1.0.7 h7f98852_1002 conda-forge
xorg-libice 1.0.10 h516909a_0 conda-forge
xorg-libsm 1.2.3 h84519dc_1000 conda-forge
xorg-libx11 1.6.12 h516909a_0 conda-forge
xorg-libxau 1.0.9 h7f98852_0 conda-forge
xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge
xorg-libxext 1.3.4 h516909a_0 conda-forge
xorg-libxpm 3.5.13 h516909a_0 conda-forge
xorg-libxrender 0.9.10 h516909a_1002 conda-forge
xorg-libxt 1.1.5 h516909a_1003 conda-forge
xorg-renderproto 0.11.1 h14c3975_1002 conda-forge
xorg-xextproto 7.3.0 h7f98852_1002 conda-forge
xorg-xproto 7.0.31 h7f98852_1007 conda-forge
xxhash 0.8.0 h7f98852_3 conda-forge
xz 5.2.5 h516909a_1 conda-forge
yaml 0.2.5 h516909a_0 conda-forge
zict 2.0.0 py_0 conda-forge
zipp 3.4.0 py_0 conda-forge
zlib 1.2.11 h516909a_1010 conda-forge
zstd 1.4.8 ha95c52a_1 conda-forge
nox > conda list --prefix=/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-8 --explicit
# This file may be used to create an environment using:
# $ conda create --name <env> --file <this file>
# platform: linux-64
@EXPLICIT
https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2020.12.5-ha878542_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-dejavu-sans-mono-2.37-hab24e00_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-inconsolata-2.001-hab24e00_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-source-code-pro-2.030-hab24e00_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-ubuntu-0.83-hab24e00_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.35.1-hea4e1c9_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libgfortran5-9.3.0-hff62375_18.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-9.3.0-h6de172a_18.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/mpi-1.0-mpich.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/mysql-common-8.0.22-ha770c72_3.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/fonts-conda-forge-1-0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libgfortran-ng-9.3.0-hff62375_18.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libgomp-9.3.0-h2828fa1_18.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-1_gnu.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/fonts-conda-ecosystem-1-0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-9.3.0-h2828fa1_18.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-h7f98852_4.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.17.1-h36c2ea0_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/expat-2.2.10-h9c3ff4c_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/fribidi-1.0.10-h36c2ea0_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/geos-3.8.1-he1b5a44_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/giflib-5.2.1-h36c2ea0_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/graphite2-1.3.13-h58526e2_1001.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/icu-68.1-h58526e2_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/jpeg-9d-h36c2ea0_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libev-4.33-h516909a_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libffi-3.3-h58526e2_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libiconv-1.16-h516909a_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libmo_unpack-3.1.2-hf484d3e_1001.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.12-pthreads_h4812303_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libtool-2.4.6-h58526e2_1007.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libuuid-2.32.1-h7f98852_1000.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libwebp-base-1.2.0-h7f98852_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/lz4-c-1.9.3-h9c3ff4c_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/mpich-3.4.1-h846660c_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.2-h58526e2_4.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/nspr-4.29-h9c3ff4c_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/openssl-1.1.1i-h7f98852_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pcre-8.44-he1b5a44_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pixman-0.40.0-h36c2ea0_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pthread-stubs-0.4-h36c2ea0_1001.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/xorg-kbproto-1.0.7-h7f98852_1002.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/xorg-libice-1.0.10-h516909a_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/xorg-libxau-1.0.9-h7f98852_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/xorg-libxdmcp-1.1.3-h7f98852_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/xorg-renderproto-0.11.1-h14c3975_1002.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/xorg-xextproto-7.3.0-h7f98852_1002.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/xorg-xproto-7.0.31-h7f98852_1007.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/xxhash-0.8.0-h7f98852_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/xz-5.2.5-h516909a_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/yaml-0.2.5-h516909a_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/zlib-1.2.11-h516909a_1010.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/gettext-0.19.8.1-h0b5b191_1005.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/hdf4-4.2.13-h10796ff_1004.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libblas-3.9.0-8_openblas.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libedit-3.1.20191231-he28a2e2_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libevent-2.1.10-hcdb4288_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libllvm11-11.0.1-hf817b99_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libnghttp2-1.43.0-h812cca2_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libpng-1.6.37-h21135ba_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libssh2-1.9.0-hab1572f_5.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libxcb-1.13-h7f98852_1003.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libxml2-2.9.10-h72842e0_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/readline-8.0-he28a2e2_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/tk-8.6.10-h21135ba_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/udunits2-2.2.27.27-h360fe7b_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/xorg-libsm-1.2.3-h84519dc_1000.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/zstd-1.4.8-ha95c52a_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/freetype-2.10.4-h0708190_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/krb5-1.17.2-h926e7f8_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libcblas-3.9.0-8_openblas.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libclang-11.0.1-default_ha53f305_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libglib-2.66.6-h1f3bc88_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/liblapack-3.9.0-8_openblas.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libtiff-4.2.0-hdc55705_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libxkbcommon-1.0.3-he3ba5ed_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/mysql-libs-8.0.22-h935591d_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/sqlite-3.34.0-h74cdb3f_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/xorg-libx11-1.6.12-h516909a_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/atk-1.0-2.36.0-h3371d22_4.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/fontconfig-2.13.1-hba837de_1004.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/gdk-pixbuf-2.42.2-h0c95a7a_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/glib-tools-2.66.6-h9c3ff4c_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/gstreamer-1.18.3-h3560a44_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/gts-0.7.6-h64030ff_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/lcms2-2.12-hddcbb42_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libcurl-7.71.1-hcdd3856_8.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libpq-12.3-h255efa7_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libwebp-1.2.0-h3452ae3_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/nss-3.61-hb5efdd6_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/python-3.8.6-hffdb5ce_5_cpython.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/xorg-libxext-1.3.4-h516909a_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/xorg-libxrender-0.9.10-h516909a_1002.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/xorg-libxt-1.1.5-h516909a_1003.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/alabaster-0.7.12-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/appdirs-1.4.4-pyh9f0ad1d_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/cairo-1.16.0-h7979940_1007.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/click-7.1.2-pyh9f0ad1d_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/cloudpickle-1.6.0-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/colorama-0.4.4-pyh9f0ad1d_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/curl-7.71.1-he644dc0_8.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/dataclasses-0.7-pyhb2cacf7_7.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/distlib-0.3.1-pyh9f0ad1d_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/filelock-3.0.12-pyh9f0ad1d_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/fsspec-0.8.5-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/glib-2.66.6-h9c3ff4c_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/hdf5-1.10.6-mpi_mpich_h996c276_1014.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/heapdict-1.0.1-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/idna-2.10-pyh9f0ad1d_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/imagesize-1.2.0-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/iris-sample-data-2.3.0-pyh9f0ad1d_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/locket-0.2.0-py_2.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/mccabe-0.6.1-py_1.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/nose-1.3.7-py_1006.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/olefile-0.46-pyh9f0ad1d_1.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pathspec-0.8.1-pyhd3deb0d_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/proj-7.2.0-he47e99f_1.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pycodestyle-2.6.0-pyh9f0ad1d_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pycparser-2.20-pyh9f0ad1d_2.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pyflakes-2.2.0-pyh9f0ad1d_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pyke-1.1.1-pyhd8ed1ab_1004.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pyparsing-2.4.7-pyh9f0ad1d_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pyshp-2.1.3-pyh44b312d_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/python_abi-3.8-1_cp38.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pytz-2021.1-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/six-1.15.0-pyh9f0ad1d_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/snowballstemmer-2.1.0-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sortedcontainers-2.3.0-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinxcontrib-applehelp-1.0.2-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinxcontrib-devhelp-1.0.2-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinxcontrib-htmlhelp-1.0.3-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinxcontrib-jsmath-1.0.1-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinxcontrib-qthelp-1.0.3-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinxcontrib-serializinghtml-1.1.4-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/tblib-1.6.0-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/toml-0.10.2-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/toolz-0.11.1-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/typing_extensions-3.7.4.3-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/wheel-0.36.2-pyhd3deb0d_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/xorg-libxpm-3.5.13-h516909a_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/zipp-3.4.0-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/antlr-python-runtime-4.7.2-py38h32f6830_1002.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/babel-2.9.0-pyhd3deb0d_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/certifi-2020.12.5-py38h578d9bd_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/cffi-1.14.4-py38ha65f79e_1.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/cfgv-3.2.0-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/chardet-4.0.0-py38h578d9bd_1.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/cycler-0.10.0-py_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/cytoolz-0.11.0-py38h497a2fe_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/dbus-1.13.6-hfdff14a_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/docutils-0.16-py38h578d9bd_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/editdistance-0.5.3-py38h709712a_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/gst-plugins-base-1.14.5-h0935bb2_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/harfbuzz-2.7.4-h5cf4720_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/importlib-metadata-3.4.0-py38h578d9bd_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/kiwisolver-1.3.1-py38h1fd1430_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libnetcdf-4.7.4-mpi_mpich_hdef422e_7.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/markupsafe-1.1.1-py38h497a2fe_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/mpi4py-3.0.3-py38he865349_5.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/msgpack-python-1.0.2-py38h1fd1430_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/mypy_extensions-0.4.3-py38h578d9bd_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/numpy-1.20.0-py38h18fd61f_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/packaging-20.9-pyh44b312d_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/partd-1.1.0-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pillow-6.2.2-py38h9776b28_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pockets-0.9.1-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/psutil-5.8.0-py38h497a2fe_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pyqt5-sip-4.19.18-py38h709712a_7.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pysocks-1.7.1-py38h578d9bd_3.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/python-dateutil-2.8.1-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/python-xxhash-2.0.0-py38h497a2fe_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pyyaml-5.4.1-py38h497a2fe_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/regex-2020.11.13-py38h497a2fe_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/tornado-6.1-py38h497a2fe_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/typed-ast-1.4.2-py38h497a2fe_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/virtualenv-20.4.2-py38h578d9bd_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/zict-2.0.0-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/black-20.8b1-py_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/brotlipy-0.7.0-py38h497a2fe_1001.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/cftime-1.2.1-py38hab2c0dc_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/cryptography-3.3.1-py38h2b97feb_1.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/dask-core-2021.2.0-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/identify-1.5.13-pyh44b312d_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/mo_pack-0.2.0-py38h5c078b8_1005.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/netcdf-fortran-4.5.3-mpi_mpich_h7ad8bfe_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pandas-1.2.2-py38h51da96c_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pango-1.42.4-h69149e4_5.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/python-stratify-0.1.1-py38h5c078b8_1003.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pywavelets-1.1.1-py38h5c078b8_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/qt-5.12.9-h9d6b050_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/scipy-1.6.0-py38hb2138dd_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/setuptools-49.6.0-py38h578d9bd_3.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/shapely-1.7.1-py38ha11d057_1.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinxcontrib-napoleon-0.7-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/asv-0.4.2-py38h709712a_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/cf-units-2.1.4-py38hab2c0dc_2.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/distributed-2021.2.0-py38h578d9bd_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/esmf-8.0.1-mpi_mpich_h3cbecb6_102.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/flake8-3.8.4-py_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/gtk2-2.24.33-hab0c2f8_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/imagehash-4.2.0-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/jinja2-2.11.3-pyh44b312d_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/matplotlib-base-3.3.4-py38h0efea84_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/netcdf4-1.5.5.1-nompi_py38h1cdf482_101.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/nodeenv-1.5.0-pyh9f0ad1d_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pip-21.0.1-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pygments-2.7.4-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pyopenssl-20.0.1-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pyqt-impl-5.12.3-py38h7400c14_7.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/bokeh-2.1.1-py38h32f6830_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/cartopy-0.18.0-py38h9b98833_8.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/esmpy-8.0.1-mpi_mpich_py38h6f0bf2d_102.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/graphviz-2.42.3-h6939c30_2.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/nc-time-axis-1.2.0-py_1.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pre-commit-2.10.1-py38h578d9bd_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pyqtchart-5.12-py38h7400c14_7.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pyqtwebengine-5.12.1-py38h7400c14_7.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pyugrid-0.3.1-py_2.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/urllib3-1.26.3-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/dask-2021.2.0-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/pyqt-5.12.3-py38h578d9bd_7.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/requests-2.25.1-pyhd3deb0d_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/matplotlib-3.3.4-py38h578d9bd_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinx-3.4.3-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinx-copybutton-0.3.1-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinx-gallery-0.8.2-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinx-panels-0.5.2-pyhd3deb0d_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/sphinx_rtd_theme-0.5.1-pyhd3deb0d_0.tar.bz2
nox > python -m iris.tests.runner --default-tests --system-tests
Running test suite(s): system, default
Running test discovery on iris.tests.system_test with 2 processors.
Running test discovery on iris.tests with 2 processors.
system_test_imports_general (iris.tests.system_test.SystemInitialTest) ... ok
system_test_supported_filetypes (iris.tests.system_test.SystemInitialTest) ... ok
----------------------------------------------------------------------
Ran 2 tests in 0.157s
OK
test_fail_different_cs (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
test_fail_no_cs (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
test_global (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
test_global_collapse (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
Check results are independent of where the grid 'seams' are. ... ok
Check missing-data handling between different coordinate systems. ... ok
Check valid operation on a multidimensional cube. ... ok
Test area-conserving regrid between different grids. ... ok
Test area-weighted regrid on more complex area. ... ok
test_same_grid (iris.tests.experimental.regrid.test_regrid_conservative_via_esmpy.TestConservativeRegrid) ... ok
Test area-conserving regrid between simple "near-square" grids. ... ok
test_save_api (iris.tests.test_pp_module.TestPPField_GlobalTemperature) ... ok
...
test_reference_time_units (iris.tests.test_quickplot.TestTimeReferenceUnitsLabels) ... ok
test_standard_names (iris.tests.test_std_names.TestStandardNames) ... ok
test_pp_callback (iris.tests.test_uri_callback.TestCallbacks) ... ok
test_2d_auxcoord_transpose (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_anonymous_dims (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_collapsed (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_reduce_dimensionality (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_scalar_auxcoord (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_slice (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_slice_and_transpose (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_transpose (iris.tests.test_util.TestAsCompatibleShape) ... ok
test_default_values (iris.tests.test_util.TestClipString) ... ok
test_invalid_clip_lengths (iris.tests.test_util.TestClipString) ... ok
test_oversize_string (iris.tests.test_util.TestClipString) ... ok
test_trim_string_with_no_spaces (iris.tests.test_util.TestClipString) ... ok
test_undersize_string (iris.tests.test_util.TestClipString) ... ok
test_different (iris.tests.test_util.TestDescribeDiff) ... ok
test_identical (iris.tests.test_util.TestDescribeDiff) ... ok
test_output_file (iris.tests.test_util.TestDescribeDiff) ... ok
test_monotonic_pve (iris.tests.test_util.TestMonotonic) ... ok
test_monotonic_strict (iris.tests.test_util.TestMonotonic) ... ok
test_not_monotonic (iris.tests.test_util.TestMonotonic) ... ok
======================================================================
FAIL: test_self_referencing_load_issue_3367 (iris.tests.integration.test_netcdf.TestSelfReferencingVarLoad)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/home/alexander/Documents/PhD/reference_code/iris/lib/iris/tests/integration/test_netcdf.py", line 405, in test_self_referencing_load_issue_3367
warn.assert_called_with(expected_msg)
File "/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-8/lib/python3.8/unittest/mock.py", line 913, in assert_called_with
raise AssertionError(_error_message()) from cause
AssertionError: expected call not found.
Expected: warn("Missing CF-netCDF measure variable 'areacello', referenced by netCDF variable 'volcello'")
Actual: warn('`np.bool` is a deprecated alias for the builtin `bool`. To silence this warning, use `bool` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.bool_` here.\nDeprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations', <class 'DeprecationWarning'>, stacklevel=2)
======================================================================
FAIL: test_square_root (iris.tests.test_basic_maths.TestExponentiate)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/home/alexander/Documents/PhD/reference_code/iris/lib/iris/tests/test_basic_maths.py", line 557, in test_square_root
self.assertArrayEqual(e.data, a.data ** 0.5)
File "/home/alexander/Documents/PhD/reference_code/iris/lib/iris/tests/__init__.py", line 587, in assertArrayEqual
np.testing.assert_array_equal(a, b, err_msg=err_msg)
File "/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-8/lib/python3.8/site-packages/numpy/testing/_private/utils.py", line 932, in assert_array_equal
assert_array_compare(operator.__eq__, x, y, err_msg=err_msg,
File "/home/alexander/Documents/PhD/reference_code/iris/.nox/tests-3-8/lib/python3.8/site-packages/numpy/testing/_private/utils.py", line 842, in assert_array_compare
raise AssertionError(msg)
AssertionError:
Arrays are not equal
Mismatched elements: 5 / 7008 (0.0713%)
Max absolute difference: 8.8817842e-16
Max relative difference: 1.96500729e-16
x: array([[2.314304, 2.314304, 2.314304, ..., 2.314304, 2.314304, 2.314304],
[2.241653, 2.243286, 2.240353, ..., 2.238803, 2.228302, 2.236692],
[2.001037, 1.921367, 1.855062, ..., 1.970571, 2.010956, 2.040697],...
y: array([[2.314304, 2.314304, 2.314304, ..., 2.314304, 2.314304, 2.314304],
[2.241653, 2.243286, 2.240353, ..., 2.238803, 2.228302, 2.236692],
[2.001037, 1.921367, 1.855062, ..., 1.970571, 2.010956, 2.040697],...
----------------------------------------------------------------------
Ran 5046 tests in 645.902s
FAILED (SKIP=22, failures=2)
nox > Command python -m iris.tests.runner --default-tests --system-tests failed with exit code 1
nox > Session tests-3.8 failed.
nox > Ran multiple sessions:
nox > * tests-3.6: failed
nox > * tests-3.7: failed
nox > * tests-3.8: failed
Environment
See above
Additional Notes
Note that test_self_referencing_load_issue_3367 (iris.tests.integration.test_netcdf.TestSelfReferencingVarLoad) also fails for Python 3.7 and 3.8, which is due to the NumPy version exceeding 1.20.0 for those environments, coupled with outdated code in netcdf4-python. This has already been addressed (see Unidata/netcdf4-python#1065), and should be available in the upcoming version 1.5.6.
Update (16/02/2021): test_self_referencing_load_issue_3367 (iris.tests.integration.test_netcdf.TestSelfReferencingVarLoad) no longer fails after upating to netcdf4 1.5.6.
akuhnregnier
All 10 comments
I have inadvertently reproduced this failure in the CI on my PR #3790 (see here for test output). Comparing this with #4112 where the equivalent tests pass, I had a look at the environment definitions using tkdiff. The only difference I can see is the version of glibc, which is v2.28 for the passing test, and v2.31 for the failing one. I note that @akuhnregnier's environment also has glibc 2.31.
Thanks @akuhnregnier for raising this!
rcomer
on 1 May 2021
👍1
Good spot @rcomer. I wonder if perhaps it's related to this change below, noted in the glibc v2.29 changelog.
- Optimized generic exp, exp2, log, log2, pow, sinf, cosf, sincosf and
tanf.
Changing to use allclose seems like a reasonable choice
jamesp
on 4 May 2021
👍3
Saying that, why are these not identical? This is the important bit of the test:
I don't know enough about the internals of iris, but surely this should be a passthrough of the __pow__ operation onto the cube data. Looking at what the test is doing -- i.e. comparing sqrt(cube) to sqrt(cube.data) -- even if the underlying numpy or glibc library implementation has changed, surely the change should be the same for both sides of this comparison.
jamesp
on 4 May 2021
😕1
@bjlittle might need your eyes on this one. My best guess is its something to do with a dtype casting here https://github.com/SciTools/iris/blob/055a60b06c63da917784ebff277d852f93a64968/lib/iris/analysis/maths.py#L498-L503
or that there is an implementation difference between np.power and np.ndarray.__pow__ that results in a different code execution here https://github.com/SciTools/iris/blob/055a60b06c63da917784ebff277d852f93a64968/lib/iris/analysis/maths.py#L511-L512
We should probably just decide whether an AllClose test protects us from the errors that these tests are designed to catch, and if so change to that and move on with our day.
jamesp
on 4 May 2021
@pp-mo have you got any thoughts on the right way to proceed with this? should we change the code, or the test?
jamesp
on 5 May 2021
IMHO you should only test floating-point data for absolute equality for _very special + rare reasons_.
But these tests are pretty ancient, and presumably written when we were less experienced!
Looking at the printed absolute and relative differences, they are really tiny.
So I wouldn't consider that significant.
So I for one would _always_ use assertArrayAllClose or assertArrayNearlyEqual, and never assertArrayEqual.
pp-mo
on 5 May 2021
surely this should be a passthrough of the __pow__ operation onto the cube data.
Well, we obviously got away with it for a long time.
Possibly the reason there is _any_ difference at all, is because the 'abs' operation used here is the Python built-in.
So that might deliver a different result from numpy.abs ? And maybe that behaviour is changing.
But I haven't manged to reproduce the error myself, so not entirely sure.
pp-mo
on 5 May 2021
IMHO you should only test floating-point data for absolute equality for _very special + rare reasons_.
But these tests are pretty ancient, and presumably written when we were less experienced!Looking at the printed absolute and relative differences, they are really tiny.
So I wouldn't consider that significant.So I for one would _always_ use assertArrayAllClose or assertArrayNearlyEqual, and never assertArrayEqual.
I think that makes a lot of sense!
surely this should be a passthrough of the pow operation onto the cube data.
Well, we obviously got away with it for a long time.
Possibly the reason there is _any_ difference at all, is because the 'abs' operation used here is the Python built-in.
So that might deliver a different result fromnumpy.abs? And maybe that behaviour is changing.
But I haven't manged to reproduce the error myself, so not entirely sure.
I was wondering about that abs too, but if I'm reading the code correctly, the check should be agnostic to the abs, as e is created after the abs call, so should have exactly the same bits.
jamesp
on 5 May 2021
Thanks @akuhnregnier for reporting this issue and apologies for taking so long to get it resolved. You saved us a ton of time debugging by providing so much detail, so thanks again! 馃嵒 on us if you're down in Exeter anytime soon.
jamesp
on 5 May 2021
🎉1
Thanks! It's great to have been helpful, and thanks for the invite :smile:
akuhnregnier
on 5 May 2021
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Most helpful comment
Good spot @rcomer. I wonder if perhaps it's related to this change below, noted in the glibc v2.29 changelog.
Changing to use
allcloseseems like a reasonable choice