"${GRAALVM_HOME}"/bin/R -e 'install.packages(c("ggplot2", "dplyr"))'
...
* installing *source* package ‘ggplot2’ ...
** package ‘ggplot2’ successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
[Use -Dgraal.LogFile=<path> to redirect Graal log output to a file.]
[truffle] opt fail envhook <split-3af82b74> |Reason java.lang.NullPointerException
java.lang.NullPointerException
at org.graalvm.compiler.phases.schedule.SchedulePhase$Instance.checkKillsBetween(SchedulePhase.java:332)
at org.graalvm.compiler.phases.schedule.SchedulePhase$Instance.calcLatestBlock(SchedulePhase.java:577)
at com.oracle.graal.enterprise.t.a$a.calcLatestBlock(stripped:526)
at org.graalvm.compiler.phases.schedule.SchedulePhase$Instance.calcLatestBlocks(SchedulePhase.java:272)
at org.graalvm.compiler.phases.schedule.SchedulePhase$Instance.run(SchedulePhase.java:205)
at com.oracle.graal.enterprise.t.a.run(stripped:105)
at org.graalvm.compiler.phases.Phase.run(Phase.java:49)
at org.graalvm.compiler.phases.BasePhase.apply(BasePhase.java:197)
at org.graalvm.compiler.phases.Phase.apply(Phase.java:42)
at org.graalvm.compiler.phases.Phase.apply(Phase.java:38)
at org.graalvm.compiler.phases.common.FixReadsPhase.run(FixReadsPhase.java:605)
at org.graalvm.compiler.phases.common.FixReadsPhase.run(FixReadsPhase.java:91)
at org.graalvm.compiler.phases.BasePhase.apply(BasePhase.java:197)
at org.graalvm.compiler.phases.BasePhase.apply(BasePhase.java:139)
at org.graalvm.compiler.phases.PhaseSuite.run(PhaseSuite.java:209)
at org.graalvm.compiler.phases.BasePhase.apply(BasePhase.java:197)
at org.graalvm.compiler.phases.BasePhase.apply(BasePhase.java:139)
at org.graalvm.compiler.core.GraalCompiler.emitFrontEnd(GraalCompiler.java:230)
at org.graalvm.compiler.core.GraalCompiler.compile(GraalCompiler.java:144)
at org.graalvm.compiler.core.GraalCompiler.compileGraph(GraalCompiler.java:129)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl.compilePEGraph(TruffleCompilerImpl.java:521)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl.compileAST(TruffleCompilerImpl.java:455)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl$TruffleCompilationWrapper.performCompilation(TruffleCompilerImpl.java:637)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl$TruffleCompilationWrapper.performCompilation(TruffleCompilerImpl.java:579)
at org.graalvm.compiler.core.CompilationWrapper.run(CompilationWrapper.java:178)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl.doCompile(TruffleCompilerImpl.java:280)
at org.graalvm.compiler.truffle.compiler.hotspot.libgraal.HotSpotToSVMEntryPoints.doCompile(HotSpotToSVMEntryPoints.java:253)
** help
[truffle] opt fail envhook <split-6de606e0> |Reason java.lang.NullPointerException
java.lang.NullPointerException
at org.graalvm.compiler.phases.schedule.SchedulePhase$Instance.checkKillsBetween(SchedulePhase.java:332)
at org.graalvm.compiler.phases.schedule.SchedulePhase$Instance.calcLatestBlock(SchedulePhase.java:577)
at com.oracle.graal.enterprise.t.a$a.calcLatestBlock(stripped:526)
at org.graalvm.compiler.phases.schedule.SchedulePhase$Instance.calcLatestBlocks(SchedulePhase.java:272)
at org.graalvm.compiler.phases.schedule.SchedulePhase$Instance.run(SchedulePhase.java:205)
at com.oracle.graal.enterprise.t.a.run(stripped:105)
at org.graalvm.compiler.phases.Phase.run(Phase.java:49)
at org.graalvm.compiler.phases.BasePhase.apply(BasePhase.java:197)
at org.graalvm.compiler.phases.Phase.apply(Phase.java:42)
at org.graalvm.compiler.phases.Phase.apply(Phase.java:38)
at org.graalvm.compiler.phases.common.FixReadsPhase.run(FixReadsPhase.java:605)
at org.graalvm.compiler.phases.common.FixReadsPhase.run(FixReadsPhase.java:91)
at org.graalvm.compiler.phases.BasePhase.apply(BasePhase.java:197)
at org.graalvm.compiler.phases.BasePhase.apply(BasePhase.java:139)
at org.graalvm.compiler.phases.PhaseSuite.run(PhaseSuite.java:209)
at org.graalvm.compiler.phases.BasePhase.apply(BasePhase.java:197)
at org.graalvm.compiler.phases.BasePhase.apply(BasePhase.java:139)
at org.graalvm.compiler.core.GraalCompiler.emitFrontEnd(GraalCompiler.java:230)
at org.graalvm.compiler.core.GraalCompiler.compile(GraalCompiler.java:144)
at org.graalvm.compiler.core.GraalCompiler.compileGraph(GraalCompiler.java:129)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl.compilePEGraph(TruffleCompilerImpl.java:521)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl.compileAST(TruffleCompilerImpl.java:455)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl$TruffleCompilationWrapper.performCompilation(TruffleCompilerImpl.java:637)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl$TruffleCompilationWrapper.performCompilation(TruffleCompilerImpl.java:579)
at org.graalvm.compiler.core.CompilationWrapper.run(CompilationWrapper.java:178)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl.doCompile(TruffleCompilerImpl.java:280)
at org.graalvm.compiler.truffle.compiler.hotspot.libgraal.HotSpotToSVMEntryPoints.doCompile(HotSpotToSVMEntryPoints.java:253)
*** installing help indices
*** copying figures
** building package indices
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl$TruffleCompilationWrapper.performCompilation(TruffleCompilerImpl.java:579)
at org.graalvm.compiler.core.CompilationWrapper.run(CompilationWrapper.java:178)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl.doCompile(TruffleCompilerImpl.java:280)
at org.graalvm.compiler.truffle.compiler.hotspot.libgraal.HotSpotToSVMEntryPoints.doCompile(HotSpotToSVMEntryPoints.java:253)
** help
[truffle] opt fail envhook <split-6de606e0> |Reason java.lang.NullPointerException
java.lang.NullPointerException
at org.graalvm.compiler.phases.schedule.SchedulePhase$Instance.checkKillsBetween(SchedulePhase.java:332)
at org.graalvm.compiler.phases.schedule.SchedulePhase$Instance.calcLatestBlock(SchedulePhase.java:577)
at com.oracle.graal.enterprise.t.a$a.calcLatestBlock(stripped:526)
at org.graalvm.compiler.phases.schedule.SchedulePhase$Instance.calcLatestBlocks(SchedulePhase.java:272)
at org.graalvm.compiler.phases.schedule.SchedulePhase$Instance.run(SchedulePhase.java:205)
at com.oracle.graal.enterprise.t.a.run(stripped:105)
at org.graalvm.compiler.phases.Phase.run(Phase.java:49)
at org.graalvm.compiler.phases.BasePhase.apply(BasePhase.java:197)
at org.graalvm.compiler.phases.Phase.apply(Phase.java:42)
at org.graalvm.compiler.phases.Phase.apply(Phase.java:38)
at org.graalvm.compiler.phases.common.FixReadsPhase.run(FixReadsPhase.java:605)
at org.graalvm.compiler.phases.common.FixReadsPhase.run(FixReadsPhase.java:91)
at org.graalvm.compiler.phases.BasePhase.apply(BasePhase.java:197)
at org.graalvm.compiler.phases.BasePhase.apply(BasePhase.java:139)
at org.graalvm.compiler.phases.PhaseSuite.run(PhaseSuite.java:209)
at org.graalvm.compiler.phases.BasePhase.apply(BasePhase.java:197)
at org.graalvm.compiler.phases.BasePhase.apply(BasePhase.java:139)
at org.graalvm.compiler.core.GraalCompiler.emitFrontEnd(GraalCompiler.java:230)
at org.graalvm.compiler.core.GraalCompiler.compile(GraalCompiler.java:144)
at org.graalvm.compiler.core.GraalCompiler.compileGraph(GraalCompiler.java:129)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl.compilePEGraph(TruffleCompilerImpl.java:521)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl.compileAST(TruffleCompilerImpl.java:455)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl$TruffleCompilationWrapper.performCompilation(TruffleCompilerImpl.java:637)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl$TruffleCompilationWrapper.performCompilation(TruffleCompilerImpl.java:579)
at org.graalvm.compiler.core.CompilationWrapper.run(CompilationWrapper.java:178)
at org.graalvm.compiler.truffle.compiler.TruffleCompilerImpl.doCompile(TruffleCompilerImpl.java:280)
at org.graalvm.compiler.truffle.compiler.hotspot.libgraal.HotSpotToSVMEntryPoints.doCompile(HotSpotToSVMEntryPoints.java:253)
...
@davleopo maybe you could look into this?
This looks like a known problem in 19.2.0, which was fixed in the development version.
Thanks @steve-s . It looks like https://github.com/oracle/graal/commit/551d577b8b177caa33781f7d0707ec6ef024ba51 is the fix.
I'm closing this issue on the optimistic assumption that the fix is in master. Please feel free to re-open it if the problem still occurs in a build that includes the fix.
Thanks, @dougxc and @steve-s!