Galaxy: Enhance History functions "Operations on multiple datasets" to include multi-download

Created on 18 Nov 2016  路  7Comments  路  Source: galaxyproject/galaxy

Add option "Download datasets" to the menu "For all selected..."

Decisions about how to handle datasets with more than one part (bam + bam.bai) should be made during implementation.

kinenhancement

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It would also be nice if you could change the datatype of many datasets at once.

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It would also be nice if you could change the datatype of many datasets at once.

And database, etc. Losing the current center screen to Edit Attributes is inconvenient when a small change is needed to launch a tool form that is already loaded.

Can this be implemented in the short term by creating a script that will download and name the datasets appropriately? Windows and *nix have built-in tools that can download URLs, of course. There could be 3 flavors: Windows (vbs), wget, and curl. It's kind of like a one-off download manager.

Longer term solutions might involve using Aspera Connect or some such.

A workaround (this works on dev) is to select everything you want to download with the checkbox, create a collection and then download the collection.

It would also be nice if you could change the datatype of many datasets at once.

Think we should break this out to a separate ticket. Yes? Thoughts @jmchilton for a weekly project?

See GTN chat and linked GHelp about why we should consider doing that, soon. Scroll up a bit for context: https://gitter.im/Galaxy-Training-Network/Lobby?at=5ce4307cb313d7231404f1b4

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