Doom-emacs: error when using `pdf-tools`: odd number of elements in hash table data

[wuqui]

What did you expect to happen?
I open a pdf and I can view and edit it using pdf-tools. This used to work just fine for weeks, but now it's stopped working.

What actually happened?

1. When I open PDFs, the PDF is not properly displayed, but I see a text-based buffer like in #3289. Thus, the issues might be related.
2. If I switch to midnight mode, it displays the PDF correctly and I can add annotations, use keyboard shortcuts to jump to the last or first page, do isearch etc. However, whenever I want to jump from one page to the next one or previous one, I get the following error: Odd number of elements in hash table data
3. When I try to re-install and rebuild pdf-tools and get prompted to rebuild epdfinfo on startup, it says that the process was successful. However, Emacs freezes, I get another error message concerning "number of elements in hash table" and I have to force-quite. I couldn't reproduce this now to give you the exact message, but could try to if that's important. I found another open issue about an error during the setup of epdfinfo here: #3244. Don't know if that's related.

Steps to reproduce:

1. open a pdffile
2. try to turn the page using pdf-view-scroll-down-or-previous-page
3. get the error doom--store-init: Odd number of elements in hash table data

System information:

emacs   version    26.3
        features   JPEG RSVG IMAGEMAGICK GLIB NOTIFY ACL GNUTLS LIBXML2 ZLIB TOOLKIT_SCROLL_BARS NS MODULES THREADS LCMS2
        build      Apr 24, 2020
        buildopts  (--disable-dependency-tracking --disable-silent-rules --enable-locallisppath=/usr/local/share/emacs/site-lisp --infodir=/usr/local/Cellar/emacs-plus/26.3/share/info/emacs --prefix=/usr/local/Cellar/emacs-plus/26.3 --with-xml2 --without-dbus --with-gnutls --with-imagemagick --with-modules --with-rsvg --with-ns --disable-ns-self-contained)
        windowsys  ns
        daemonp    server-running
doom    version    2.0.9
        build      HEAD -> develop 042cc781b 2020-06-20 03:02:05 -0400
        dir        ~/.doom.d/
system  type       darwin
        config     x86_64-apple-darwin19.2.0
        shell      /usr/local/bin/zsh
        uname      Darwin 19.2.0 Darwin Kernel Version 19.2.0: Sat Nov  9 03:47:04 PST 2019; root:xnu-6153.61.1~20/RELEASE_X86_64 x86_64
        path       (~/anaconda3/condabin ~/anaconda3/bin /usr/local/bin /usr/bin /bin /usr/sbin /sbin /Library/TeX/texbin /opt/X11/bin /opt/ImageMagick/bin ~/.local/bin /usr/local/Cellar/emacs-plus/26.3/libexec/emacs/26.3/x86_64-apple-darwin19.2.0/)
config  envfile    envvar-file
        elc-files  149
        modules    (:completion company ivy :ui doom doom-dashboard doom-quit hl-todo modeline ophints (popup +defaults) treemacs vc-gutter vi-tilde-fringe workspaces zen :editor (evil +everywhere) file-templates fold multiple-cursors snippets :emacs dired electric ibuffer undo vc :term eshell vterm :checkers syntax grammar :tools (eval +overlay) lookup macos magit pdf :lang emacs-lisp ess (latex +latexmk +fold) markdown (org +roam) python sh :config literate (default +bindings +smartparens))
        packages   ((windresize) (org-ref) (lorem-ipsum) (latex-extra) (org-noter) (org-download) (org-roam-server) (org-journal) (org-tree-slide) (dired-narrow) (dired-subtree) (ov) (outline-magic :recipe (:host github :repo tj64/outline-magic)) (treemacs-icons-dired) (org-roam-bibtex))
        unpin      (n/a)
        elpa       (n/a)

[hlissner]

Please produce a backtrace from the error.

[wuqui]

Had tried to last time and did not get one, but it creates a backtrace now when I try to open a pdf file:

Debugger entered--Lisp error: (error "Odd number of elements in hash table data")
  read(#<buffer  *temp*>)
  doom--store-init("pdf-view")
  doom--store-get("/Users/quirin/promo/bib/pdfs/Goel2016SocialDynamics.pdf" "pdf-view" nil)
  doom-store-get("/Users/quirin/promo/bib/pdfs/Goel2016SocialDynamics.pdf" "pdf-view")
  +pdf-restore-page-number-h()
  run-hooks(change-major-mode-after-body-hook special-mode-hook pdf-view-mode-hook)
  apply(run-hooks (change-major-mode-after-body-hook special-mode-hook pdf-view-mode-hook))
  run-mode-hooks(pdf-view-mode-hook)
  pdf-view-mode()
  set-auto-mode-0(pdf-view-mode nil)
  #f(compiled-function (&optional keep-mode-if-same) "Select major mode appropriate for current buffer.\n\nTo find the right major mode, this function checks for a -*- mode tag\nchecks for a `mode:' entry in the Local Variables section of the file,\nchecks if it uses an interpreter listed in `interpreter-mode-alist',\nmatches the buffer beginning against `magic-mode-alist',\ncompares the filename against the entries in `auto-mode-alist',\nthen matches the buffer beginning against `magic-fallback-mode-alist'.\n\nIf `enable-local-variables' is nil, or if the file name matches\n`inhibit-local-variables-regexps', this function does not check\nfor any mode: tag anywhere in the file.  If `local-enable-local-variables'\nis nil, then the only mode: tag that can be relevant is a -*- one.\n\nIf the optional argument KEEP-MODE-IF-SAME is non-nil, then we\nset the major mode only if that would change it.  In other words\nwe don't actually set it to the same mode the buffer already has." #<bytecode 0x400923ab>)()
  apply(#f(compiled-function (&optional keep-mode-if-same) "Select major mode appropriate for current buffer.\n\nTo find the right major mode, this function checks for a -*- mode tag\nchecks for a `mode:' entry in the Local Variables section of the file,\nchecks if it uses an interpreter listed in `interpreter-mode-alist',\nmatches the buffer beginning against `magic-mode-alist',\ncompares the filename against the entries in `auto-mode-alist',\nthen matches the buffer beginning against `magic-fallback-mode-alist'.\n\nIf `enable-local-variables' is nil, or if the file name matches\n`inhibit-local-variables-regexps', this function does not check\nfor any mode: tag anywhere in the file.  If `local-enable-local-variables'\nis nil, then the only mode: tag that can be relevant is a -*- one.\n\nIf the optional argument KEEP-MODE-IF-SAME is non-nil, then we\nset the major mode only if that would change it.  In other words\nwe don't actually set it to the same mode the buffer already has." #<bytecode 0x400923ab>) nil)
  so-long--set-auto-mode(#f(compiled-function (&optional keep-mode-if-same) "Select major mode appropriate for current buffer.\n\nTo find the right major mode, this function checks for a -*- mode tag\nchecks for a `mode:' entry in the Local Variables section of the file,\nchecks if it uses an interpreter listed in `interpreter-mode-alist',\nmatches the buffer beginning against `magic-mode-alist',\ncompares the filename against the entries in `auto-mode-alist',\nthen matches the buffer beginning against `magic-fallback-mode-alist'.\n\nIf `enable-local-variables' is nil, or if the file name matches\n`inhibit-local-variables-regexps', this function does not check\nfor any mode: tag anywhere in the file.  If `local-enable-local-variables'\nis nil, then the only mode: tag that can be relevant is a -*- one.\n\nIf the optional argument KEEP-MODE-IF-SAME is non-nil, then we\nset the major mode only if that would change it.  In other words\nwe don't actually set it to the same mode the buffer already has." #<bytecode 0x400923ab>))
  apply(so-long--set-auto-mode #f(compiled-function (&optional keep-mode-if-same) "Select major mode appropriate for current buffer.\n\nTo find the right major mode, this function checks for a -*- mode tag\nchecks for a `mode:' entry in the Local Variables section of the file,\nchecks if it uses an interpreter listed in `interpreter-mode-alist',\nmatches the buffer beginning against `magic-mode-alist',\ncompares the filename against the entries in `auto-mode-alist',\nthen matches the buffer beginning against `magic-fallback-mode-alist'.\n\nIf `enable-local-variables' is nil, or if the file name matches\n`inhibit-local-variables-regexps', this function does not check\nfor any mode: tag anywhere in the file.  If `local-enable-local-variables'\nis nil, then the only mode: tag that can be relevant is a -*- one.\n\nIf the optional argument KEEP-MODE-IF-SAME is non-nil, then we\nset the major mode only if that would change it.  In other words\nwe don't actually set it to the same mode the buffer already has." #<bytecode 0x400923ab>) nil)
  #f(advice-wrapper :around #f(compiled-function (&optional keep-mode-if-same) "Select major mode appropriate for current buffer.\n\nTo find the right major mode, this function checks for a -*- mode tag\nchecks for a `mode:' entry in the Local Variables section of the file,\nchecks if it uses an interpreter listed in `interpreter-mode-alist',\nmatches the buffer beginning against `magic-mode-alist',\ncompares the filename against the entries in `auto-mode-alist',\nthen matches the buffer beginning against `magic-fallback-mode-alist'.\n\nIf `enable-local-variables' is nil, or if the file name matches\n`inhibit-local-variables-regexps', this function does not check\nfor any mode: tag anywhere in the file.  If `local-enable-local-variables'\nis nil, then the only mode: tag that can be relevant is a -*- one.\n\nIf the optional argument KEEP-MODE-IF-SAME is non-nil, then we\nset the major mode only if that would change it.  In other words\nwe don't actually set it to the same mode the buffer already has." #<bytecode 0x400923ab>) so-long--set-auto-mode)()
  apply(#f(advice-wrapper :around #f(compiled-function (&optional keep-mode-if-same) "Select major mode appropriate for current buffer.\n\nTo find the right major mode, this function checks for a -*- mode tag\nchecks for a `mode:' entry in the Local Variables section of the file,\nchecks if it uses an interpreter listed in `interpreter-mode-alist',\nmatches the buffer beginning against `magic-mode-alist',\ncompares the filename against the entries in `auto-mode-alist',\nthen matches the buffer beginning against `magic-fallback-mode-alist'.\n\nIf `enable-local-variables' is nil, or if the file name matches\n`inhibit-local-variables-regexps', this function does not check\nfor any mode: tag anywhere in the file.  If `local-enable-local-variables'\nis nil, then the only mode: tag that can be relevant is a -*- one.\n\nIf the optional argument KEEP-MODE-IF-SAME is non-nil, then we\nset the major mode only if that would change it.  In other words\nwe don't actually set it to the same mode the buffer already has." #<bytecode 0x400923ab>) so-long--set-auto-mode) nil)
  set-auto-mode()
  normal-mode(t)
  #f(compiled-function (&optional error warn noauto after-find-file-from-revert-buffer nomodes) "Called after finding a file and by the default revert function.\nSets buffer mode, parses file-local and directory-local variables.\nOptional args ERROR, WARN, and NOAUTO: ERROR non-nil means there was an\nerror in reading the file.  WARN non-nil means warn if there\nexists an auto-save file more recent than the visited file.\nNOAUTO means don't mess with auto-save mode.\nFourth arg AFTER-FIND-FILE-FROM-REVERT-BUFFER is ignored\n(see `revert-buffer-in-progress-p' for similar functionality).\nFifth arg NOMODES non-nil means don't alter the file's modes.\nFinishes by calling the functions in `find-file-hook'\nunless NOMODES is non-nil." #<bytecode 0x40091bc7>)(nil t)
  apply(#f(compiled-function (&optional error warn noauto after-find-file-from-revert-buffer nomodes) "Called after finding a file and by the default revert function.\nSets buffer mode, parses file-local and directory-local variables.\nOptional args ERROR, WARN, and NOAUTO: ERROR non-nil means there was an\nerror in reading the file.  WARN non-nil means warn if there\nexists an auto-save file more recent than the visited file.\nNOAUTO means don't mess with auto-save mode.\nFourth arg AFTER-FIND-FILE-FROM-REVERT-BUFFER is ignored\n(see `revert-buffer-in-progress-p' for similar functionality).\nFifth arg NOMODES non-nil means don't alter the file's modes.\nFinishes by calling the functions in `find-file-hook'\nunless NOMODES is non-nil." #<bytecode 0x40091bc7>) (nil t))
  doom--optimize-for-large-files-a(#f(compiled-function (&optional error warn noauto after-find-file-from-revert-buffer nomodes) "Called after finding a file and by the default revert function.\nSets buffer mode, parses file-local and directory-local variables.\nOptional args ERROR, WARN, and NOAUTO: ERROR non-nil means there was an\nerror in reading the file.  WARN non-nil means warn if there\nexists an auto-save file more recent than the visited file.\nNOAUTO means don't mess with auto-save mode.\nFourth arg AFTER-FIND-FILE-FROM-REVERT-BUFFER is ignored\n(see `revert-buffer-in-progress-p' for similar functionality).\nFifth arg NOMODES non-nil means don't alter the file's modes.\nFinishes by calling the functions in `find-file-hook'\nunless NOMODES is non-nil." #<bytecode 0x40091bc7>) nil t)
  apply(doom--optimize-for-large-files-a #f(compiled-function (&optional error warn noauto after-find-file-from-revert-buffer nomodes) "Called after finding a file and by the default revert function.\nSets buffer mode, parses file-local and directory-local variables.\nOptional args ERROR, WARN, and NOAUTO: ERROR non-nil means there was an\nerror in reading the file.  WARN non-nil means warn if there\nexists an auto-save file more recent than the visited file.\nNOAUTO means don't mess with auto-save mode.\nFourth arg AFTER-FIND-FILE-FROM-REVERT-BUFFER is ignored\n(see `revert-buffer-in-progress-p' for similar functionality).\nFifth arg NOMODES non-nil means don't alter the file's modes.\nFinishes by calling the functions in `find-file-hook'\nunless NOMODES is non-nil." #<bytecode 0x40091bc7>) (nil t))
  #f(advice-wrapper :around #f(compiled-function (&optional error warn noauto after-find-file-from-revert-buffer nomodes) "Called after finding a file and by the default revert function.\nSets buffer mode, parses file-local and directory-local variables.\nOptional args ERROR, WARN, and NOAUTO: ERROR non-nil means there was an\nerror in reading the file.  WARN non-nil means warn if there\nexists an auto-save file more recent than the visited file.\nNOAUTO means don't mess with auto-save mode.\nFourth arg AFTER-FIND-FILE-FROM-REVERT-BUFFER is ignored\n(see `revert-buffer-in-progress-p' for similar functionality).\nFifth arg NOMODES non-nil means don't alter the file's modes.\nFinishes by calling the functions in `find-file-hook'\nunless NOMODES is non-nil." #<bytecode 0x40091bc7>) doom--optimize-for-large-files-a)(nil t)
  apply(#f(advice-wrapper :around #f(compiled-function (&optional error warn noauto after-find-file-from-revert-buffer nomodes) "Called after finding a file and by the default revert function.\nSets buffer mode, parses file-local and directory-local variables.\nOptional args ERROR, WARN, and NOAUTO: ERROR non-nil means there was an\nerror in reading the file.  WARN non-nil means warn if there\nexists an auto-save file more recent than the visited file.\nNOAUTO means don't mess with auto-save mode.\nFourth arg AFTER-FIND-FILE-FROM-REVERT-BUFFER is ignored\n(see `revert-buffer-in-progress-p' for similar functionality).\nFifth arg NOMODES non-nil means don't alter the file's modes.\nFinishes by calling the functions in `find-file-hook'\nunless NOMODES is non-nil." #<bytecode 0x40091bc7>) doom--optimize-for-large-files-a) (nil t))
  #f(advice-wrapper :before #f(advice-wrapper :around #f(compiled-function (&optional error warn noauto after-find-file-from-revert-buffer nomodes) "Called after finding a file and by the default revert function.\nSets buffer mode, parses file-local and directory-local variables.\nOptional args ERROR, WARN, and NOAUTO: ERROR non-nil means there was an\nerror in reading the file.  WARN non-nil means warn if there\nexists an auto-save file more recent than the visited file.\nNOAUTO means don't mess with auto-save mode.\nFourth arg AFTER-FIND-FILE-FROM-REVERT-BUFFER is ignored\n(see `revert-buffer-in-progress-p' for similar functionality).\nFifth arg NOMODES non-nil means don't alter the file's modes.\nFinishes by calling the functions in `find-file-hook'\nunless NOMODES is non-nil." #<bytecode 0x40091bc7>) doom--optimize-for-large-files-a) doom-first-file-hook-h)(nil t)
  apply(#f(advice-wrapper :before #f(advice-wrapper :around #f(compiled-function (&optional error warn noauto after-find-file-from-revert-buffer nomodes) "Called after finding a file and by the default revert function.\nSets buffer mode, parses file-local and directory-local variables.\nOptional args ERROR, WARN, and NOAUTO: ERROR non-nil means there was an\nerror in reading the file.  WARN non-nil means warn if there\nexists an auto-save file more recent than the visited file.\nNOAUTO means don't mess with auto-save mode.\nFourth arg AFTER-FIND-FILE-FROM-REVERT-BUFFER is ignored\n(see `revert-buffer-in-progress-p' for similar functionality).\nFifth arg NOMODES non-nil means don't alter the file's modes.\nFinishes by calling the functions in `find-file-hook'\nunless NOMODES is non-nil." #<bytecode 0x40091bc7>) doom--optimize-for-large-files-a) doom-first-file-hook-h) (nil t))
  after-find-file(nil t)
  find-file-noselect-1(#<buffer Goel2016SocialDynamics.pdf> "~/promo/bib/pdfs/Goel2016SocialDynamics.pdf" nil nil "~/promo/bib/pdfs/Goel2016SocialDynamics.pdf" (8866303337 16777220))
  find-file-noselect("/Users/quirin/promo/bib/pdfs/Goel2016SocialDynamics.pdf" nil nil nil)
  find-file("/Users/quirin/promo/bib/pdfs/Goel2016SocialDynamics.pdf")
  counsel-find-file-action("/Users/quirin/promo/bib/pdfs/Goel2016SocialDynamics.pdf")
  ivy-call()
  ivy-read("Find file: " read-file-name-internal :matcher counsel--find-file-matcher :initial-input nil :action counsel-find-file-action :preselect nil :require-match confirm-after-completion :history file-name-history :keymap (keymap (remap keymap (undo . counsel-find-file-undo)) (96 lambda (&optional arg) "nil (`nil')" (interactive "p") (if (string= "" ivy-text) (execute-kbd-macro (kbd "M-o b")) (self-insert-command arg))) (C-backspace . counsel-up-directory) (67108991 . counsel-up-directory)) :caller counsel-find-file)
  counsel--find-file-1("Find file: " nil counsel-find-file-action counsel-find-file)
  counsel-find-file()
  funcall-interactively(counsel-find-file)
  call-interactively(counsel-find-file nil nil)
  command-execute(counsel-find-file)

[xiaolaoc]

I come across the same problem, has it been fixed?

[wuqui]

No, I still get the same error. I hope my comment up there didn't falsely suggest it was working now. But I'm kind of glad to hear I'm not the only one facing this issue.

[wuqui]

I did a re-install of Doom tonight and that got rid of the error. I don't know how. I kept my configs so basically only the packages were re-loaded. The only thing I changed was that I got rid of chemacs. That's all I can say, you can close the issue if you want, thanks for trying to help.

[dangirsh]

I just hit this, and a Doom upgrade + package update didn't help. The error occurs when running pdf-tools-install, and then subsequently when opening / interacting with PDFs.

Update: A fresh Doom install seems to have helped. This issue appeared immediately after upgrading my OS from Ubuntu 18.04 -> 20.04.

Debugger entered--Lisp error: (error "Hash table data is not a list of even length")
  read(#<buffer  *temp*>)
  (progn (set-buffer-multibyte nil) (setq buffer-file-coding-system 'binary) (insert-file-contents-literally location-path) (read (current-buffer)))
  (unwind-protect (progn (set-buffer-multibyte nil) (setq buffer-file-coding-system 'binary) (insert-file-contents-literally location-path) (read (current-buffer))) (and (buffer-name temp-buffer) (kill-buffer temp-buffer)))
  (save-current-buffer (set-buffer temp-buffer) (unwind-protect (progn (set-buffer-multibyte nil) (setq buffer-file-coding-system 'binary) (insert-file-contents-literally location-path) (read (current-buffer))) (and (buffer-name temp-buffer) (kill-buffer temp-buffer))))
  (let ((temp-buffer (generate-new-buffer " *temp*"))) (save-current-buffer (set-buffer temp-buffer) (unwind-protect (progn (set-buffer-multibyte nil) (setq buffer-file-coding-system 'binary) (insert-file-contents-literally location-path) (read (current-buffer))) (and (buffer-name temp-buffer) (kill-buffer temp-buffer)))))
  (puthash location (let ((temp-buffer (generate-new-buffer " *temp*"))) (save-current-buffer (set-buffer temp-buffer) (unwind-protect (progn (set-buffer-multibyte nil) (setq buffer-file-coding-system 'binary) (insert-file-contents-literally location-path) (read (current-buffer))) (and (buffer-name temp-buffer) (kill-buffer temp-buffer))))) doom--store-table)
  (if (file-exists-p location-path) (puthash location (let ((temp-buffer (generate-new-buffer " *temp*"))) (save-current-buffer (set-buffer temp-buffer) (unwind-protect (progn (set-buffer-multibyte nil) (setq buffer-file-coding-system 'binary) (insert-file-contents-literally location-path) (read (current-buffer))) (and (buffer-name temp-buffer) (kill-buffer temp-buffer))))) doom--store-table) (puthash location (make-hash-table :test 'equal) doom--store-table))
  (let* ((file-name-handler-alist nil) (location-path (expand-file-name location doom-store-dir))) (if (file-exists-p location-path) (puthash location (let ((temp-buffer (generate-new-buffer " *temp*"))) (save-current-buffer (set-buffer temp-buffer) (unwind-protect (progn (set-buffer-multibyte nil) (setq buffer-file-coding-system ...) (insert-file-contents-literally location-path) (read ...)) (and (buffer-name temp-buffer) (kill-buffer temp-buffer))))) doom--store-table) (puthash location (make-hash-table :test 'equal) doom--store-table)))
  (or (gethash location doom--store-table) (let* ((file-name-handler-alist nil) (location-path (expand-file-name location doom-store-dir))) (if (file-exists-p location-path) (puthash location (let ((temp-buffer (generate-new-buffer " *temp*"))) (save-current-buffer (set-buffer temp-buffer) (unwind-protect (progn ... ... ... ...) (and ... ...)))) doom--store-table) (puthash location (make-hash-table :test 'equal) doom--store-table))))
  doom--store-init("pdf-view")
  (puthash key (cons (if ttl (time-add (current-time) ttl)) value) (doom--store-init location))
  doom--store-put("something.pdf" 4 "pdf-view" nil)
  doom-store-put("something.pdf" 4 nil "pdf-view")
  (if page (doom-store-put buffer-file-name page nil "pdf-view") nil)
  (let* ((page (and t (and buffer-file-name (pdf-view-current-page))))) (if page (doom-store-put buffer-file-name page nil "pdf-view") nil))
  +pdf-remember-page-number-h()
  run-hooks(pdf-view-change-page-hook)
  pdf-view-goto-page(4)
  pdf-view-next-page-command(1)
  funcall-interactively(pdf-view-next-page-command 1)
  call-interactively(pdf-view-next-page-command nil nil)
  command-execute(pdf-view-next-page-command)

emacs   version    28.0.50
        features   XPM JPEG TIFF GIF PNG RSVG CAIRO SOUND DBUS GSETTINGS GLIB NOTIFY INOTIFY LIBSELINUX GNUTLS LIBXML2 FREETYPE HARFBUZZ ZLIB TOOLKIT_SCROLL_BARS GTK3 X11 XDBE XIM MODULES THREADS PDUMPER LCMS2
        build      Aug 05, 2020
        buildopts  (--with-modules)
        windowsys  x
        daemonp    server-running
doom    version    2.0.9
        build      HEAD -> develop 00a8f750e 2020-08-05 03:32:21 -0400
        dir        ~/.doom.d/
system  type       gnu/linux
        config     x86_64-pc-linux-gnu
        shell      /bin/bash
        uname      Linux 5.4.0-42-generic #46-Ubuntu SMP Fri Jul 10 00:24:02 UTC 2020 x86_64
        path       (~/.cargo/bin ~/.nix-profile/bin ~/.guix-profile/bin /usr/local/sbin /usr/local/bin /usr/sbin /usr/bin /sbin /bin /usr/games /usr/local/games /snap/bin /usr/local/go/bin ~/emacs-src-new/lib-src/)
config  envfile    envvar-file
        elc-files  0
        modules    (:personal neurosys :completion (company +childframe) (ivy +prescient +childframe) :ui deft doom hl-todo modeline nav-flash zen :editor lispy multiple-cursors word-wrap :emacs dired electric vc :term vterm :checkers syntax :tools direnv (eval +overlay) docker lookup (magit +forge) pass pdf :lang common-lisp data emacs-lisp javascript (haskell +dante) (latex +latexmk +cdlatex) markdown nix (org +journal +hugo +jupyter) rust sh :app calendar :config literate (default +bindings +smartparens))
        packages   ((ace-window) (aggressive-indent) (company-org-roam :recipe (:host github :repo jethrokuan/company-org-roam)) (company-posframe) (deadgrep) (dired-narrow) (dmenu) (google-this) (helpful) (jest) (key-chord) (org-cliplink) (org-download) (org-drill) (org-noter) (org-recoll :recipe (:host github :repo alraban/org-recoll)) (org-ref) (org-roam :recipe (:host github :repo jethrokuan/org-roam)) (org-roam-bibtex) (org-roam-server) (phi-search) (ob-rust) (real-auto-save) (smartscan) (toc-org) (undo-tree) (wrap-region) (julia-mode :pin 1c122f1dff) (julia-snail) (julia-repl :recipe (:host github :repo tpapp/julia-repl :branch tp/terminal-backends)))
        unpin      (n/a)
        elpa       (n/a)

[hlissner]

@wuqui Are you still experiencing this issue? If so, try deleting ~/.emacs.d/.local/etc/store/* and see if that resolves the issue.

[wuqui]

No, I have fixed the issue by re-installing Doom in the meantime. Everything's working fine again now.

[pereiragc]

I am also experiencing this issue.

Backtrace: https://pastebin.com/JSD51qaA

./doom info: https://pastebin.com/WmT3Mt3v

EDIT: following

@wuqui Are you still experiencing this issue? If so, try deleting ~/.emacs.d/.local/etc/store/* and see if that resolves the issue.

fixes the issue for me.

[chayward1]

@wuqui Are you still experiencing this issue? If so, try deleting ~/.emacs.d/.local/etc/store/* and see if that resolves the issue.

Just came across this issue after installing exwm and this fixed it for me. Is there a method in the doom cli that can remedy this sort of thing automatically? I tried "clean" and "purge" but felt as if I was missing a "nuke" option lol

[hlissner]

Is there a method in the doom cli that can remedy this sort of thing automatically? I tried "clean" and "purge" but felt as if I was missing a "nuke" option lol

Unfortunately not. It's not very safe to delete those files unless a problem occurs, and if a problem occurs, it's not possible to tell _which_ store it came from. If we were to delete them all, this might cause more problems than it would solve.

In any case, this was caused by a bug in the :tools pdf module, which was fixed quite some time ago, so I'll consider this resolved.

[hlissner]

Just summarizing the solution here since this issue seems to be popping up more these days:

Deleting the ~/.emacs.d/.local/etc/store/pdf-view file will fix this issue.