Deeplabcut: small shifting issue with labeling frames

Created on 16 Aug 2020  路  15Comments  路  Source: DeepLabCut/DeepLabCut

Hi all,
I have noticed for a time now that there is a very small (but yet annoying) shifting problem with the GUI labeling option.
Each time I'm labeling some frames, if I go back to some previous frames which I already labeled I see that some of the placements had changed. This is a very small shifting, but yet important for the accuracy of the training.

(my operating system and dlc version:) Windows 10, Anaconda 3 Env (GPU) & DeepLabCut 2.2b6

Attached are some screenshots of the same labeled frame with the noticeable shifting:

image
image

bug
Source
picture or-naim

All 15 comments

can you upgrade to the current repo, i.e. run pip install git+https://github.com/DeepLabCut/DeepLabCut.git and see if this persists? Indeed that is an issue!

can you also tell me the versions of pandas and matplotlib you are using?

import matplotlib
matplotlib.__version__

import pandas
pandas.__version__
MMathisLab picture MMathisLab on 16 Aug 2020

(NOTE: this was introduced only in 2.2beta; before this bug didn't exist and is not fixed).

AlexEMG picture AlexEMG on 17 Aug 2020

@AlexEMG, that's incorrect. I can reproduce it too with 2.1.8.2; and the PR now addresses both single and multi-animal labeling.

jeylau picture jeylau on 17 Aug 2020
😕1

Oh!

AlexEMG picture AlexEMG on 17 Aug 2020

I am having this issue on Centos with v2.1.8.2. We are not having this problem with .mp4 video files but are with .wmv files after extraction.

alec-hoyland picture alec-hoyland on 18 Aug 2020

@alec-hoyland you can pip install git+ https://github.com/DeepLabCut/DeepLabCut.git To update.

MMathisLab picture MMathisLab on 18 Aug 2020
👍1

Ups, we should merge the PR first 馃槃

jeylau picture jeylau on 18 Aug 2020

the matplotlib version: 3.1.1
the pandas version: 0.25.1

I tried to upgrade to the current repo, but unfortunately the problem persists.

or-naim picture or-naim on 21 Aug 2020

@or-naim, when did you clone the repo? I cannot reproduce this behavior any longer :/

jeylau picture jeylau on 21 Aug 2020

On the very same day (21.8.20)

or-naim picture or-naim on 26 Aug 2020

Would you mind sharing a short GIF of you triggering that label shift? That'd be super helpful :)

jeylau picture jeylau on 26 Aug 2020

Sure. As soon as possible 馃憤

or-naim picture or-naim on 26 Aug 2020
👍1

gif shift problem

or-naim picture or-naim on 26 Aug 2020

^whoa, that is super odd. I have never seen this. what version of wxPython are you using?

MMathisLab picture MMathisLab on 26 Aug 2020

4.0.4

or-naim picture or-naim on 26 Aug 2020
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