This is interesting, are you perhaps using a custom font?
I noticed it would go away if a moved font size to 14. 12 still makes it come back. No custom fonts
I also started getting this behavior today without changing preferences. It only seems to happen using Dank Mono without ligatures.
Specs
macOS Sierra Version 10.12.6
Chrome Version 67.0.3396.99 (Official Build) (64-bit)
Example

I have reverted Dank Mono for now, I will take a look tomorrow how these character width calculations drift off.
Should be fixed now!
Fixed in #975. @yurikoex , @EmilTholin please let us know if it works.
It works like a charm! Thank you for the quick work.