Cbioportal: Add a optional warning to all pages

[jjgao]

MSK users sometimes put internal urls in their publications. e.g.

http://ascopubs.org/doi/full/10.1200/JCO.2017.75.3384

We need to be able to add a warning and ask them not to do that.

• [ ] add a new property in frontend or backend: study_view_warning
• [ ] append the warning at the end of the description of a study
• [ ] add a warning for all our private portal: "Please do NOT include the URL to this study or any other pages on this portal in your publication. If you need to make a study for your publication in the public cBioPortal, please contact [email protected]."

[stale[bot]]

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[jjgao]

this is still happening. But maybe the message I put above is a bit too long.

thoughts, @schultzn ?

[schultzn]

How about just "Study URL is temporary - do NOT include in publications."

[inodb]

This applies to all studies in MSKCC/triage portals right? If so, maybe we can make it more general i.e. allow to add some blurb to the description of all studies in a portal. For example a skin.study_view.blurb. Similar to skin.blurb: https://docs.cbioportal.org/2.3-customization/portal.properties-reference#control-the-content-of-specific-sections.

[jjgao]

@inodb sounds good. Yes, to all studies.

[stale[bot]]

This issue has been automatically marked as stale because it has not had recent activity. It will be closed if no further activity occurs. Thank you for your contributions.

[inodb]

we should do this

[Leowisd]

[jjgao]

Thanks, @Leowisd. It looks good!

For the last one, could you add "transferred to the public cBioPortal"?

Is this message configurable? e.g. we should have a message in the private portal too.

@schultzn @n1zea144 comments?

[Leowisd]

Okay.

[alisman]

• [x] Alert at top should read/appear as follows (notice wording change):
  
• [x] The UI/text in the modal should be changed as follows: (**= bold text)

Reverse the order of items so the link warning is first, and the guidelines second.

When adding a link to a cBioPortal cohort in a manuscript, **I will not link to the internal MSK portal (cbioportal.mskcc.org)**, but will instead link to this study on the public cBioPortal (cbioportal.org). Contact [email protected] with any questions about getting the data transferred to the public cBioPortal.

[Leowisd]

Got it

[Leowisd]

[alisman]

@Leowisd we only want to do this when
["triage-portal","mskcc-portal"].includes(AppConfig.serverConfig.app_name)

you may have to import AppConfig if it's not already imported on your page