Cartopy: Lines don't appear when plotting with >1000 points

Created on 16 Jan 2020  Â·  3Comments  Â·  Source: SciTools/cartopy

Description


ax.plot stops showing the line on the axis if there are more than 1000 lat/lon points on a Mercator projection (haven't tried others). The problem doesn't occur if the longitude crosses 0 or I manually transform the points before plotting them.

It might be related to #1240 and #1246, though in this case, lines are desired, not just markers.

Code to reproduce

An example of the problem. Going from 1000 points to 1001 points suddenly prevents the line from showing up.

import cartopy.crs as ccrs
import matplotlib.pyplot as plt
import numpy as np

fig, axes = plt.subplots(1, 2, subplot_kw={'projection': ccrs.Mercator()})
for ax, num_points in zip(axes, [1000, 1001]):
    lats = np.linspace(35, 37, num_points)
    lons = np.linspace(-117, -115, num_points)
    ax.plot(lons, lats, transform=ccrs.PlateCarree())
    ax.set_title(f'Number of lat/lon points: {num_points}')

num_points_bad

Manually transforming the points prior to plotting fixes the problem.

import cartopy.crs as ccrs
import matplotlib.pyplot as plt
import numpy as np

fig, axes = plt.subplots(1, 2, subplot_kw={'projection': ccrs.Mercator()})
for ax, num_points in zip(axes, [1000, 1001]):
    lats = np.linspace(35, 37, num_points)
    lons = np.linspace(-117, -115, num_points)
    points = ax.projection.transform_points(ccrs.PlateCarree(), lons, lats)
    lines2 = ax.plot(points[:, 0], points[:, 1])
    ax.set_title(f'Number of lat/lon points: {num_points}')

num_points_good

Traceback



Full environment definition

Operating system

Windows 10
Matplotlib backend: Qt5Agg

Cartopy version

Cartopy 0.17.0 (conda py36h5ae9855_1)

conda list

# packages in environment at C:\anaconda3\envs\pyprop:
#
# Name                    Version                   Build  Channel
alabaster                 0.7.12                   py36_0  
altgraph                  0.16.1                     py_0  
apipkg                    1.5                      py36_0  
asn1crypto                1.2.0                    py36_0  
aspy.yaml                 1.3.0                      py_0    conda-forge
astroid                   2.3.3                    py36_0  
atomicwrites              1.3.0                    py36_1  
attrs                     19.3.0                     py_0  
autopep8                  1.4.4                      py_0  
babel                     2.8.0                      py_0  
backcall                  0.1.0                    py36_0  
blas                      1.0                         mkl  
ca-certificates           2019.11.27                    0  
cached-property           1.5.1                      py_1  
cartopy                   0.17.0           py36h5ae9855_1  
certifi                   2019.11.28               py36_0  
cffi                      1.13.2           py36h7a1dbc1_0  
cfgv                      2.0.1                      py_0    conda-forge
chardet                   3.0.4                 py36_1003  
cloudpickle               1.2.2                      py_0  
colorama                  0.4.3                      py_0  
construct                 2.9.45                     py_0    conda-forge
coverage                  5.0              py36he774522_0  
cryptography              2.8              py36h7a1dbc1_0  
cycler                    0.10.0           py36h009560c_0  
cython                    0.29.14          py36ha925a31_0  
decorator                 4.4.1                      py_0  
docutils                  0.15.2                   py36_0  
editdistance              0.5.3            py36h6538335_0    conda-forge
entrypoints               0.3                      py36_0  
execnet                   1.7.1                      py_0  
flake8                    3.7.9                    py36_0  
freetype                  2.9.1                ha9979f8_1  
future                    0.18.2                   py36_0  
geos                      3.7.1                h33f27b4_0  
icc_rt                    2019.0.0             h0cc432a_1  
icu                       58.2                 ha66f8fd_1  
identify                  1.4.9                      py_0    conda-forge
idna                      2.8                      py36_0  
imagesize                 1.2.0                      py_0  
importlib_metadata        1.3.0                    py36_0  
importlib_resources       1.0.2                 py36_1000    conda-forge
intel-openmp              2019.4                      245  
ipykernel                 5.1.3            py36h39e3cac_0  
ipython                   7.11.1           py36h39e3cac_0  
ipython_genutils          0.2.0                    py36_0  
isort                     4.3.21                   py36_0  
jedi                      0.15.2                   py36_0  
jinja2                    2.10.3                     py_0  
joblib                    0.14.1                     py_0  
jpeg                      9b                   hb83a4c4_2  
jupyter_client            5.3.4                    py36_0  
jupyter_core              4.6.1                    py36_0  
kiwisolver                1.1.0            py36ha925a31_0  
lazy-object-proxy         1.4.3            py36he774522_0  
libiconv                  1.15                 h1df5818_7  
libpng                    1.6.37               h2a8f88b_0  
libsodium                 1.0.16               h9d3ae62_0  
libtiff                   4.1.0                h56a325e_0  
libxml2                   2.9.9                h464c3ec_0  
libxslt                   1.1.33               h579f668_0  
lxml                      4.4.2            py36h1350720_0  
macholib                  1.11                       py_0  
markupsafe                1.1.1            py36he774522_0  
matplotlib                3.1.1            py36hc8f65d3_0  
mccabe                    0.6.1                    py36_1  
mkl                       2019.4                      245  
mkl-service               2.3.0            py36hb782905_0  
mkl_fft                   1.0.15           py36h14836fe_0  
mkl_random                1.1.0            py36h675688f_0  
more-itertools            8.0.2                      py_0  
nodeenv                   1.3.4                      py_0    conda-forge
numpy                     1.17.4           py36h4320e6b_0  
numpy-base                1.17.4           py36hc3f5095_0  
olefile                   0.46                     py36_0  
openssl                   1.1.1d               he774522_3  
owslib                    0.18.0                     py_0  
packaging                 20.0                       py_0  
pandas                    0.25.3           py36ha925a31_0  
parso                     0.5.2                      py_0  
pefile                    2019.4.18                  py_0  
pickleshare               0.7.5                    py36_0  
pillow                    7.0.0            py36hcc1f983_0  
pip                       19.3.1                   py36_0  
pluggy                    0.13.1                   py36_0  
pre-commit                1.21.0                   py36_0    conda-forge
proj4                     5.2.0                ha925a31_1  
prompt_toolkit            3.0.2                      py_0  
py                        1.8.1                      py_0  
py-cpuinfo                5.0.0                      py_0  
pycodestyle               2.5.0                    py36_0  
pycparser                 2.19                     py36_0  
pycrypto                  2.6.1            py36hfa6e2cd_9  
pyepsg                    0.4.0                    py36_0  
pyflakes                  2.1.1                    py36_0  
pygments                  2.5.2                      py_0  
pyinstaller               3.4              py36h2a8f88b_1  
pykdtree                  1.3.1            py36h8c2d366_2  
pylint                    2.4.4                    py36_0  
pyopenssl                 19.1.0                   py36_0  
pyparsing                 2.4.6                      py_0  
pyproj                    1.9.6            py36h6782396_0  
pyqt                      5.9.2            py36h6538335_2  
pyshp                     2.1.0                      py_0  
pysocks                   1.7.1                    py36_0  
pytest                    5.3.2                    py36_0  
pytest-benchmark          3.2.2                    py36_0  
pytest-cov                2.8.1                      py_0  
pytest-flake8             1.0.4                    py36_0    conda-forge
pytest-forked             1.1.3                      py_0  
pytest-pylint             0.14.1                     py_0    conda-forge
pytest-runner             5.2                        py_0  
pytest-xdist              1.30.0                     py_0  
python                    3.6.10               h9f7ef89_0  
python-dateutil           2.8.1                      py_0  
python-pptx               0.6.18                     py_0    conda-forge
pytz                      2019.3                     py_0  
pywin32                   227              py36he774522_0  
pywin32-ctypes            0.2.0                    py36_0  
pyyaml                    5.2              py36he774522_0  
pyzmq                     18.1.0           py36ha925a31_0  
qt                        5.9.7            vc14h73c81de_0  
requests                  2.22.0                   py36_1  
scikit-learn              0.22.1           py36h6288b17_0  
scipy                     1.3.2            py36h29ff71c_0  
setuptools                44.0.0                   py36_0  
shapely                   1.6.4            py36h222a598_0  
simplekml                 1.3.1                    pypi_0    pypi
sip                       4.19.8           py36h6538335_0  
six                       1.13.0                   py36_0  
snowballstemmer           2.0.0                      py_0  
sphinx                    2.3.1                      py_0  
sphinxcontrib-applehelp   1.0.1                      py_0  
sphinxcontrib-devhelp     1.0.1                      py_0  
sphinxcontrib-htmlhelp    1.0.2                      py_0  
sphinxcontrib-jsmath      1.0.1                      py_0  
sphinxcontrib-qthelp      1.0.2                      py_0  
sphinxcontrib-serializinghtml 1.1.3                      py_0  
spyder-kernels            1.8.1                    py36_0  
sqlite                    3.30.1               he774522_0  
tk                        8.6.8                hfa6e2cd_0  
toml                      0.10.0           py36h28b3542_0  
tornado                   6.0.3            py36he774522_0  
tox                       2.8.1                    py36_0    conda-forge
tqdm                      4.40.2                     py_0  
traitlets                 4.3.3                    py36_0  
typed-ast                 1.4.0            py36he774522_0  
urllib3                   1.25.7                   py36_0  
vc                        14.1                 h0510ff6_4  
virtualenv                16.7.5                     py_0  
vs2015_runtime            14.16.27012          hf0eaf9b_1  
wcwidth                   0.1.7                    py36_0  
wheel                     0.33.6                   py36_0  
win_inet_pton             1.1.0                    py36_0  
wincertstore              0.2              py36h7fe50ca_0  
wrapt                     1.11.2           py36he774522_0  
xlsxwriter                1.2.7                      py_0  
xz                        5.2.4                h2fa13f4_4  
yaml                      0.1.7                hc54c509_2  
yapf                      0.28.0                     py_0  
zeromq                    4.3.1                h33f27b4_3  
zipp                      0.6.0                      py_0  
zlib                      1.2.11               h62dcd97_3  
zstd                      1.3.7                h508b16e_0  

pip list

Package                       Version             Location
----------------------------- ------------------- ------------------------------------------------------------------
alabaster                     0.7.12
altgraph                      0.16.1
apipkg                        1.5
asn1crypto                    1.2.0
aspy.yaml                     1.3.0
astroid                       2.3.3
atomicwrites                  1.3.0
attrs                         19.3.0
autopep8                      1.4.4
Babel                         2.8.0
backcall                      0.1.0
cached-property               1.5.1
Cartopy                       0.17.0
certifi                       2019.11.28
cffi                          1.13.2
cfgv                          2.0.1
chardet                       3.0.4
cloudpickle                   1.2.2
colorama                      0.4.3
construct                     2.9.45
coverage                      5.0
cryptography                  2.8
cycler                        0.10.0
Cython                        0.29.14
decorator                     4.4.1
docutils                      0.15.2
editdistance                  0.5.3
entrypoints                   0.3
execnet                       1.7.1
flake8                        3.7.9
future                        0.18.2
identify                      1.4.9
idna                          2.8
imagesize                     1.2.0
importlib-metadata            1.3.0
importlib-resources           1.0.2
ipykernel                     5.1.3
ipython                       7.11.1
ipython-genutils              0.2.0
isort                         4.3.21
jedi                          0.15.2
Jinja2                        2.10.3
joblib                        0.14.1
jupyter-client                5.3.4
jupyter-core                  4.6.1
kiwisolver                    1.1.0
lazy-object-proxy             1.4.3
lxml                          4.4.2
macholib                      1.11
MarkupSafe                    1.1.1
matplotlib                    3.1.1
mccabe                        0.6.1
mkl-fft                       1.0.15
mkl-random                    1.1.0
mkl-service                   2.3.0
more-itertools                8.0.2
nodeenv                       1.3.4
numpy                         1.17.4
olefile                       0.46
OWSLib                        0.18.0
packaging                     20.0
pandas                        0.25.3
parso                         0.5.2
pefile                        2019.4.18
pickleshare                   0.7.5
Pillow                        7.0.0
pip                           19.3.1
pluggy                        0.13.1
pre-commit                    1.21.0
prompt-toolkit                3.0.2
py                            1.8.1
py-cpuinfo                    5.0.0
pycodestyle                   2.5.0
pycparser                     2.19
pycrypto                      2.6.1
pyepsg                        0.4.0
pyflakes                      2.1.1
Pygments                      2.5.2
PyInstaller                   3.4
pykdtree                      1.3.1
pylint                        2.4.4
pyOpenSSL                     19.1.0
pyparsing                     2.4.6
pyproj                        1.9.6
pyshp                         2.1.0
PySocks                       1.7.1
pytest                        5.3.2
pytest-benchmark              3.2.2
pytest-cov                    2.8.1
pytest-flake8                 1.0.4
pytest-forked                 1.1.3
pytest-pylint                 0.14.1
pytest-runner                 5.2
pytest-xdist                  1.30.0
python-dateutil               2.8.1
python-pptx                   0.6.18
pytz                          2019.3
pywin32                       227
pywin32-ctypes                0.2.0
PyYAML                        5.2
pyzmq                         18.1.0
requests                      2.22.0
scikit-learn                  0.22.1
scipy                         1.3.2
setuptools                    44.0.0.post20200106
Shapely                       1.6.4.post1
simplekml                     1.3.1
six                           1.13.0
snowballstemmer               2.0.0
Sphinx                        2.3.1
sphinxcontrib-applehelp       1.0.1
sphinxcontrib-devhelp         1.0.1
sphinxcontrib-htmlhelp        1.0.2
sphinxcontrib-jsmath          1.0.1
sphinxcontrib-qthelp          1.0.2
sphinxcontrib-serializinghtml 1.1.3
spyder-kernels                1.8.1
toml                          0.10.0
tornado                       6.0.3
tox                           2.8.1
tqdm                          4.40.2
traitlets                     4.3.3
typed-ast                     1.4.0
urllib3                       1.25.7
virtualenv                    16.7.5
wcwidth                       0.1.7
wheel                         0.33.6
win-inet-pton                 1.1.0
wincertstore                  0.2
wrapt                         1.11.2
XlsxWriter                    1.2.7
yapf                          0.28.0
zipp                          0.6.0

Most helpful comment

So the root problem is that given the data here (things in order and > 1000 points) we're triggering an optimization in matplotlib for lines--on that doesn't work for us since our transforms are not generally rectilinear. The fix is to set the axes name to something other than 'rectilinear'. That should also give a workaround for any who need it, just:

ax.name = 'cartopy'

I'll send in a PR in a second.

All 3 comments

1000 seems to be a very suspiciously round number, but I don't see anything that seems to mention it.

Related to an issue I opened last year: https://github.com/SciTools/cartopy/issues/1357

So the root problem is that given the data here (things in order and > 1000 points) we're triggering an optimization in matplotlib for lines--on that doesn't work for us since our transforms are not generally rectilinear. The fix is to set the axes name to something other than 'rectilinear'. That should also give a workaround for any who need it, just:

ax.name = 'cartopy'

I'll send in a PR in a second.

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