Argo: Consider implementing the Common Workflow Language standard

Created on 2 Jun 2018  路  7Comments  路  Source: argoproj/argo

https://www.commonwl.org

enhancement help wanted
Source
picture mr-c
👍21

Most helpful comment

+1

Would be willing to contribute to this.

picture madkinsz on 31 Jul 2019
👍3

All 7 comments

+1

jackywu picture jackywu on 11 Sep 2018
👍2

+1

xianlubird picture xianlubird on 22 Apr 2019
👍1

+1

Would be willing to contribute to this.

madkinsz picture madkinsz on 31 Jul 2019
👍3

maybe we could consider to parse both wdl/cwl into DAG and parse inputs as parameters in argo, take NAS volume as an example PoC, then go object storage.

https://github.com/gatk-workflows/broad-prod-wgs-germline-snps-indels/blob/master/JointGenotypingWf.wdl
https://github.com/gatk-workflows/broad-prod-wgs-germline-snps-indels/blob/master/JointGenotypingWf.hg38.inputs.json

cuericlee picture cuericlee on 1 Nov 2019

+1

bbrauzzi picture bbrauzzi on 13 May 2020

This is unlikely to be developed by the core team at this time - it is a perfect piece of work for community contribution.

alexec picture alexec on 13 May 2020

+1

openbioinfo picture openbioinfo on 19 Jun 2020
Was this page helpful?
0 / 5 - 0 ratings

Related issues

mac9416 picture mac9416  路  4Comments
alexlatchford picture alexlatchford  路  3Comments
basanthjenuhb picture basanthjenuhb  路  3Comments
hden picture hden  路  3Comments
kounoike picture kounoike  路  4Comments